KEGG   Caenorhabditis briggsae (nematode): CBG_15258
Entry
CBG_15258         CDS       T01054                                 
Name
(RefSeq) Protein CBG15258
  KO
K19178  POLQ-like helicase [EC:5.6.2.4]
Organism
cbr  Caenorhabditis briggsae (nematode)
Brite
KEGG Orthology (KO) [BR:cbr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cbr03400]
    CBG_15258
Enzymes [BR:cbr01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     CBG_15258
DNA repair and recombination proteins [BR:cbr03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Helicases
    CBG_15258
SSDB
Motif
Pfam: DEAD POLQ_helical Helicase_C ResIII HTH_61 CRISPR_Cas2 HemN_C
Other DBs
NCBI-GeneID: 8584967
NCBI-ProteinID: XP_045095627
WormBase: CBG15258
LinkDB
Position
III
AA seq 913 aa
MEKTPVRRSKSVDLDDPFTPIPKLSNLRSPRTSREFICPLRTTPPPEGSENSTTIPPSPV
RKRGIEESSVTPLHRKNGPPLLKKSSMSKLADGFRSAANLINEGENDDDPFGLSFRNYQI
LLSKKVPETSRRIPDEEEVIDPSKCLPERAMEKYKRIKKLEKFYDWQQECLSDKRLLNGE
NCILSLPTGAGKTLIAEILMLREAIVHKRNAILVLPYVAIVQEKISSLAPFEDAFGINIE
EYASNKGRFPPIKRRKRVSVYVATIEKANMLINSLITQNQLDQIGMVVVDELHMIGDGGR
GAILEQLLAKFLYKGSGQIVGMSATLPNIDDLQFALRSFVYSTNFRPVELAEFVKIGQTM
HQVENGGDLKPAGDLPTNNLKSTDPDGICQLLAKLIPKSSAVIFCPNKKNCENVAVLIAK
TLPAHIRQAKRAESEAFLQSYLTDNDDERMDADLKQCILSGVAYHHSGLTQDERKCVEAA
FMEGLIYVVCATSTLAAGVNLPVRRVIIKCPMVGRERLGKAQYLQMAGRAGRAGFDTKGD
CITIVKQGEEERWFREMLKSDIPRCMSSLSSVEAMGSFILDMIVLKIAKNLEEVLLGVQY
SLYAAQESPDKIRELVEKSLQRLEEHRFLTIEDREITPSDLGSAVFNAGFAPEEATRLHT
DLISSLNQGVIFSSHFHLLFIITPYEQVCNINWDLFLLLYNALPQSERKLLGECGLEEKF
ILEAIITRVDLIAGTTRMRLYIALMLQKIWNHEPMFQVAERFGVEKGWLQATLQSSISQA
ASIAKFSEKITTMWPLRKLLPELVQRLSEAAQPELLPLMTVDGVKKARAAILFKAGYKTV
GMVSTNVFLMTTNYKFQIARANPLKLVQELGTIRLAQAKSIINSAKMVLRDQVDEKMEEL
DVWGVATDNFDYF
NT seq 2742 nt   +upstreamnt  +downstreamnt
atggagaaaactccggtacgacggagtaagtctgtagatttagatgatccattcacaccg
attccaaaattgtccaatctccgatccccacgaacatcccgagaattcatatgtcctctg
agaaccacgcctcctccagaaggctctgaaaattcaacgactattccaccatctccagta
cgaaaacgtggcattgaagagtcttcagtaacccctctacaccgaaaaaatgggccacca
ctgttgaaaaaaagctcgatgagcaaattagccgatggctttcgatcggctgcgaatcta
ataaacgaaggagagaatgatgatgatcccttcggattgtcattccgaaactatcaaatt
ctcttgtcgaaaaaggttccagagacttccagacgaattccagatgaagaagaagtgata
gatccatcgaaatgtcttccagaacgagctatggaaaagtacaaaaggataaaaaagcta
gaaaaattttacgactggcagcaagagtgtctttccgataagcgtctgttaaacggagaa
aattgtattctttcattgccaactggtgctggaaaaacgttgatcgctgagattctgatg
cttcgagaagccatagtgcacaagagaaatgcgattctggtgctgccctacgtggcaatt
gtgcaggaaaagatttcctcgctggctccatttgaagacgcattcggcataaatatagaa
gaatatgcatctaacaagggtcgtttcccacctataaaacgaaggaaacgagtatcagtc
tacgtagcaaccattgaaaaagccaatatgctcatcaactctcttatcactcaaaaccag
cttgaccagattgggatggttgttgtcgatgagctgcatatgattggtgacggtggacgt
ggtgcaattctagagcagctattggctaaatttctgtacaaagggagcggacagatagtt
ggaatgtccgcgacacttccgaacattgatgacctacaattcgcccttcgatcctttgtg
tacagcactaacttccgtcctgtggaacttgcagaattcgtgaagattggccaaactatg
catcaagtggagaatggtggcgatttaaaaccagctggtgatcttccaacgaacaacttg
aaatccactgatcccgatggcatttgccagttgcttgctaaactgataccaaaaagttcc
gccgtcattttctgtccaaacaagaaaaattgtgagaatgtggctgtgttgattgcaaaa
actcttccagcccacatcagacaagcaaaacgagcggaaagtgaagcatttctgcagtcc
tatctaacggataacgatgatgagaggatggacgcggatctgaaacaatgtattctgtct
ggagtggcctatcatcattcaggtttgacacaggatgagaggaagtgtgtggaggcggcg
ttcatggaaggtctgatctacgtagtatgtgccacatctactctagccgccggcgtcaat
ctccctgtccgtcgtgtaatcatcaaatgcccaatggttggtagagagcgactaggcaaa
gctcaataccttcaaatggctgggagagctggaagagcaggattcgataccaagggagac
tgcatcacaatagtgaaacaaggagaggaggaacgatggttcagggaaatgctgaaatcc
gatattcccagatgtatgagctctttgtcgagtgttgaagcgatgggatcttttattttg
gatatgattgtgctgaaaatcgcaaaaaatctggaagaagtgttgcttggagtacagtac
tccttgtatgccgctcaagagtctccggataagattcgggaactcgtggaaaaaagtttg
caacgtctagaagagcaccgcttcctcaccattgaagatagagagatcacaccctcagat
ttgggtagcgcagttttcaatgctggatttgctccggaagaggccacacgtctacatacc
gacctaatttcatccctaaatcaaggtgtcattttctcttctcatttccatttgctcttc
attattacaccttatgagcaagtttgcaatatcaattgggatcttttcttgctattgtac
aacgccttaccacaaagcgaacgaaagctattgggagagtgtggtctcgaagagaaattc
atactggaagccataatcacacgcgtagatctcattgctggaacaactcgaatgcgtctt
tacattgctctcatgctccaaaaaatttggaatcacgagccaatgttccaggtggcagag
cggtttggtgtagagaagggatggttgcaagcgacacttcagtcctcgatttctcaggct
gcatcgattgcaaagttttcggagaaaatcaccacaatgtggccactgcgaaaattgctc
cccgagttggtacagaggctttccgaagctgctcaacctgaattattacctcttatgact
gtggatggggtcaaaaaggcgcgtgcagcgattctgttcaaagcaggctacaagacggtt
ggaatggtgagcactaatgtcttccttatgactacaaactacaaatttcagatcgctcgt
gccaacccgctgaaattggttcaagagctaggcacgattcgactcgcccaggcaaagtca
atcatcaacagtgcaaaaatggttcttcgtgatcaggtggatgagaaaatggaagagttg
gacgtttggggtgttgccactgataactttgattatttttaa

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