Caenorhabditis briggsae (nematode): CBG_15306
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Entry
CBG_15306 CDS
T01054
Symbol
Cbr-mlh-1
Name
(RefSeq) Protein CBR-MLH-1
KO
K08734
DNA mismatch repair protein MLH1
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr03430
Mismatch repair
cbr03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
CBG_15306 (Cbr-mlh-1)
03460 Fanconi anemia pathway
CBG_15306 (Cbr-mlh-1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbr03400
]
CBG_15306 (Cbr-mlh-1)
DNA repair and recombination proteins [BR:
cbr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
CBG_15306 (Cbr-mlh-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Peptidase_S30
Motif
Other DBs
NCBI-GeneID:
8585125
NCBI-ProteinID:
XP_045095682
WormBase:
CBG15306
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Position
III:complement(14295726..14299907)
Genome browser
AA seq
761 aa
AA seq
DB search
MGLIQRLPEDVVNRMAAGEVLARPCNAIKELVENSLDAGATEIKVMMQNGGLKTLQVSDN
GKGIEREDFELVCERFATSKLQKFEDLMHMKTYGFRGEALASLSHVAKVNIVSKRADAKC
AYQDGKLLAPTKPAAGKNGTCITATDLFYNLPTRRNKMTTHGEEAKMVYDTLLRFAIHRP
DVSFALHQNQSSDFRTKGDGNFRDVVCNLLGRDVADTVIPISLDSNRLKFKFTGKISKPI
ASATSKNAQNRKTSRSFFSVFINGRSVRCDILKHPIDDVLQNRSLCVQFCALHLEIDETR
IDVNVHPTKSSVIFLEKEEIIEEIREYFEKFINDLFGLPDRTEAVKEKEKEEEENEENLK
FQFSQIPILTTQSIKSIESFRRASTSNSENGFKLKSSADPKKRVDHMEVRTDAKERKIDE
FVVRGPMKRPRGNDSDEEDVFENLDDVEIQMTQNTTELDDGVSMVSMASGLGGDRRMNES
QDLGEDEDLLENGTTYREFEFESLEILRHQIASSASLSLRELIKTSTFVGSIDPETVLIQ
FGTSLYMLKFSEILREFFYQISILSFGNYGSYRLEEETPLIIDMLELIGELSETDENYKA
FSIFRDPTTREEAEFLLGEHVELLYDYFAIKMEWMCLEGEKRRLHITEIPSLVHHYVPQL
EKLPFLVASLILDVEYDDEQKCFQSICRAIAELFTLHSPFITAEKKVSAFCGTHWKPLIK
QVLMPLVKRKFIPPEHFKSADIFVQLADSHDLYKVFERCGS
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atgggtctgatccaacgtcttccagaagacgttgtgaatcgaatggcggctggagaagtg
ctcgcaaggccatgtaatgcaataaaagagcttgttgaaaactctctagacgctggtgca
actgaaataaaggttatgatgcagaatggaggtttgaaaacactccaagtgtcggataat
ggaaaaggaatcgaacgagaggattttgaattggtttgcgagagattcgccacttcgaaa
ctacaaaaattcgaagatttgatgcatatgaagacgtacggattcagaggagaagcgtta
gcatcgctaagccacgtggcaaaagttaatatcgtttcgaaacgggcggatgcaaagtgc
gcataccaggatggaaaacttcttgcacccacaaaaccagccgccggtaaaaatggaaca
tgtatcaccgcaaccgacctattttataatcttccaacacgaaggaataagatgacaacc
catggagaagaagccaaaatggtctacgacacattgctcagattcgcgattcatcgacca
gatgtgtcatttgcactccatcagaatcagtcgagtgattttcgaacaaaaggcgacgga
aattttcgagatgttgtttgtaatttgttaggacgagatgtggctgatacagtgatccca
atttcactggattcaaatcgtctgaaattcaaattcactgggaaaatctcgaaaccaatc
gcatcggcaacatcgaaaaatgcgcaaaatcgaaaaacgagccgatcgttttttagtgtt
tttatcaatggacgaagtgtgagatgtgacattttaaagcatccgattgatgatgtttta
cagaatcgatcgctttgtgttcaattctgtgcattgcacctggaaattgatgaaacccga
attgatgtcaacgttcatccgacgaaatcatcggtgatttttctggaaaaagaggaaatt
attgaggaaattcgggaatattttgagaaattcattaacgatttatttggacttcctgat
agaacagaagctgtgaaagaaaaagaaaaagaagaagaagaaaatgaggagaatctgaaa
ttccagttttcccaaattccaattctaacaacccaatcgatcaaatcaattgaatcgttt
cgacgggcatccacctcgaatagtgagaatggtttcaaattaaaatcctctgctgatccc
aaaaagcgtgtagaccatatggaagttcgaacagacgccaaagagaggaaaatcgacgaa
ttcgttgttcgcggtcccatgaaacggccacgtggcaacgattcagatgaagaagacgtt
tttgagaatctagatgacgtggagattcagatgacacagaatactacagaattggatgat
ggtgtttcgatggtttctatggctagtggattagggggagatcgacgaatgaatgaatca
caagatttaggagaggatgaggatttgctggaaaatgggacaacctatcgcgagtttgag
ttcgaatctctcgaaattctccgccatcaaatcgcttcgtctgcgtctctttctctccgc
gaactaataaagaccagcacatttgtgggttcgattgatccagaaacggtccttattcaa
tttggaacttcgctatatatgctcaaattctctgaaatcctccgagaatttttctatcaa
atttccattctctcatttggcaattatgggtcatatcggctggaagaagagactccatta
attatcgatatgctcgaattgattggggaattgagtgagactgatgagaattataaggcg
ttttcgatatttcgagacccaactacacgagaagaggcggagtttttgttaggtgaacac
gtggaactactgtatgactattttgcaatcaaaatggaatggatgtgtttagaaggagag
aaaaggagactccacatcacggaaatcccatcactagtacaccattatgttccacaactc
gagaaacttccatttctagtcgcctcgctgattttggatgtcgaatatgatgatgaacaa
aaatgtttccaatcgatttgtcgtgcgatcgctgaactcttcacacttcactctccattt
attacggccgagaaaaaagtgtcggcattttgtggaacgcactggaagccactaatcaaa
caagtcctcatgccacttgtcaaacgaaaattcattccgcctgagcattttaaaagtgcc
gatatttttgtgcaattagctgattctcatgacctgtataaggttttcgaacggtgtggt
tcttaa
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