Caenorhabditis briggsae (nematode): CBG_15739
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Entry
CBG_15739 CDS
T01054
Symbol
Cbr-lgc-37
Name
(RefSeq) Protein CBR-LGC-37
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr04080
Neuroactive ligand-receptor interaction
cbr04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
CBG_15739 (Cbr-lgc-37)
04082 Neuroactive ligand signaling
CBG_15739 (Cbr-lgc-37)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cbr04040
]
CBG_15739 (Cbr-lgc-37)
Ion channels [BR:
cbr04040
]
Ligand-gated channels
GABA-A
CBG_15739 (Cbr-lgc-37)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
MFS_Mycoplasma
Motif
Other DBs
NCBI-GeneID:
8582845
NCBI-ProteinID:
XP_002640851
WormBase:
CBG15739
UniProt:
A8XMN8
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Position
III:complement(1375296..1381094)
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AA seq
500 aa
AA seq
DB search
MVTVFILPIIALIHGHHSQELIDLTKKQRLNSRSTTYNQTLIRYTTKVLDTILLNQDKNF
RPMNPDNSPLQVEVDISVRSMGPISEQNMEFSLDCYFRQKWLDRRLAFTPINPSKPEIPL
ASKMLKDIWVPDTYIRNGRKSYLHTLTVPNILFRVRSDGQVHVSQRLTIRSRCQMFLKKF
PMDTQACPIEVGSLGYFSKDVIYRWKEVELDSKMGNMLSQYQILSLSKSERNVSDFRYTD
RNISVLNVYFKLQRQQGYYILQIYTPCTLVVVMSWVSFWINKEASPARVSLGIMTVLSMS
TIGFGLRTDLPKVSHSTALDVYILSCFVFLFAAMVEYAVINYAQIVYIRKQVNDLKGLGQ
NSAMGQMFSAGLMGAARRDTMQVDDLAVEKEEARLKAVPWWKKLCNKDEQGNTSVFFKKI
EKIQKLQKFAVFYRMAVKAAIAKKTLRNGDPAEVVNKIDNFSKWAFPTLYIVFNVFYWVA
YLHLIPDEIDSLPNISGGLY
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atggttactgtattcatcctcccaattatcgccctaatccatggccaccattctcaggag
ctcatagatttgacaaagaaacagagactcaatagcagaagcaccacctataaccagact
ttgattcgatacactacaaaggtcctggatacaattttgttgaatcaagacaaaaatttt
agacctatgaatccagacaattctccccttcaagtcgaggtggacatctctgtaaggtcc
atggggccaatttccgagcagaatatggaattctctctggactgctatttccgtcaaaaa
tggttggatcgacgattggcattcactccaatcaacccatcgaaaccggaaattccattg
gcatcgaaaatgctcaaagacatttgggtcccggatacgtatattagaaatggacgaaaa
tcctatctacacactctcacagtgccgaatatcttgtttagagttaggtctgatggtcag
gtgcatgtttcgcagagattaaccatccgttcccgatgtcaaatgttcctcaaaaagttt
ccaatggatacccaagcgtgtcccatagaagtcggatccttgggctacttttcaaaagac
gtcatctatcgatggaaggaagttgagctggattcaaagatgggaaatatgctcagccag
tatcaaatactttctctctcgaaatccgagagaaatgtctctgattttcgatatactgac
agaaacatatccgttctaaacgtctatttcaaactacaacgtcaacaaggctactatatc
ctccaaatttacaccccttgcactttggtcgttgtcatgtcatgggtctcattctggatc
aacaaagaagcgtcgccagcaagggtctcattgggtattatgaccgttttatcgatgagt
accattggattcggtttgaggacggatcttcccaaagtttcacactctactgctctggat
gtgtacatattgtcctgctttgtcttcctgtttgccgcgatggtggagtatgccgtgatc
aattacgcccaaattgtgtatattcgaaagcaagtaaacgatttgaagggtctcggacag
aatagtgcgatgggacaaatgttcagtgctgggttgatgggcgccgccagaagggacacc
atgcaagtggacgatttggctgtggaaaaagaggaagcacggctcaaggcggtcccgtgg
tggaagaaattgtgcaataaggatgagcaaggaaatacatcagtatttttcaaaaaaatt
gaaaaaatccaaaaactccaaaaatttgcagttttctaccgtatggccgtaaaagctgca
atcgctaagaaaacactgaggaatggggatcctgcggaggtcgtcaacaaaatcgataat
ttctcaaaatgggcgttcccaacactatatatagtttttaatgttttctactgggtcgca
tatcttcatttgatacccgatgagattgatagtttacccaatatctctggtggcttgtat
taa
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