KEGG   Caenorhabditis briggsae (nematode): CBG_16098
Entry
CBG_16098         CDS       T01054                                 
Name
(RefSeq) Protein CBG16098
  KO
K11593  eukaryotic translation initiation factor 2C
Organism
cbr  Caenorhabditis briggsae (nematode)
Pathway
cbr04361  Axon regeneration
Brite
KEGG Orthology (KO) [BR:cbr00001]
 09150 Organismal Systems
  09158 Development and regeneration
   04361 Axon regeneration
    CBG_16098
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cbr03019]
    CBG_16098
   03036 Chromosome and associated proteins [BR:cbr03036]
    CBG_16098
Messenger RNA biogenesis [BR:cbr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     CBG_16098
Chromosome and associated proteins [BR:cbr03036]
 Eukaryotic type
  Gene silencing
   RISC (RNA-induced silencing complex)
    CBG_16098
   RNA interference (RNAi) pathway
    RITS (RNA-induced transcriptional silencing) complex
     CBG_16098
   microRNA pathway
    RISC loading complex
     CBG_16098
SSDB
Motif
Pfam: Piwi PAZ ArgoL2 ArgoN
Other DBs
NCBI-GeneID: 8585448
NCBI-ProteinID: XP_045095917
WormBase: CBG16098
UniProt: A8XN44
LinkDB
Position
X:complement(<2232187..>2236826)
AA seq 1045 aa
MSNYNDEYDRCGGGGDRGGYRDNYNDRNDNRNNPRGGNDYRYDGGYNDNTTRRNDYQNGN
NDRYRGGGQDNCFYSDRGCGRGESDARGVYEREYLQSLHNIVPQLDRMNLNNMNLQYGYR
APQRCTAGTSNPGELSGGADHPRMPVAKKDLAHNQQTFYERPDTSIYENPRCGKNTELLT
NHALVHLPTTSIILYEYNIDVFKGRKKLEKREEAGPMFWEILQTVPNHIFPPARDFIYND
ANLIWSTKKLPSHENEVRGRNRNWFYYKYTRCVELNSELATNGQDSQLISTLVDAIATAR
VRWPKQTGNKFSVFKKSIFLLQGRLDKGAFADAPVFVKHRNGVDARIGFSVAIKLNLRIG
ITACFDVSHTLFTRPGYPLVRLFWELIYGETLENDQILDGEWDSDMQRATPTESNIQLMS
SVLEKMTLIFSPEDGITFDKEGKCHQTDLRRLKSRGREFKFYQFGPNSTFEFFDERARRE
ISVAEYFLAAYNYRIRYPNLPCLQKKPSKMNPHRLVLYPMELVSLLVDPIRYTGAVTEKL
KGDLIKYTTLSADHRRLVLRHVIGQKAIGDCPQIVDNEDRYMQNHGIRIGKEMLSVKACL
LPAPEVVYGNTTFMDTENRGEWKALTNDPIRTVLEDAVYMRNRNRNAPKLKKRLLGSILK
IGSPMNSTGFEIDDSGYHHLMRAIHEAGQPVCWQIPELGQAAIQGSTEYLQGRDLPGTIL
DWFISLKKNLDEYKQSEDEVIVPLVFVIFEVRFTTLNLERQDFQNDYTEPTLLLGVDVSH
PSTRDLKGEDHVKRLSIATVVGNIDLDCTEYRASSKIQDVGEERIVRFENEILERICNFV
QFTGKRPAHIVIYRDGLSEGDFQRTLYEEKRSVETACRSIAADFNPTLTYIVVTKRHHTR
FFLKNEEEGLAEQGFNVRPGTLVEDTVTTKNYYDFFLTTQVGQIGLARLTHYYVLHNDWK
VPATFWPTVTHALTYLFCRSTSTVNFPAPVLYAHLAAKKAKETMDGALYANALLGKILDT
SSFADLAQLERCIKNHEELDGMTFV
NT seq 3138 nt   +upstreamnt  +downstreamnt
atgagcaactacaacgacgaatacgatcgttgtggaggaggtggagatcgtggtggctac
agggacaactacaacgatcgtaacgacaacaggaacaatccacgtggtggtaacgactac
agatacgatggtggctacaacgacaatacgacaagacgtaacgactaccaaaacggaaac
aatgatcggtaccgaggtggcggccaggacaactgcttctacagcgatcgtggatgcggt
cgtggagaatccgacgctcgtggcgtctatgagcgagaatatcttcaatctcttcacaat
atcgtcccccaattggaccgaatgaacttgaacaacatgaacctacaatacggctaccgc
gctccgcagcgatgcactgccggaacgtccaacccaggagagctttccggtggcgccgat
catccgagaatgccagttgccaagaaagacttggcccacaaccagcagacgttctacgag
cgcccggacacttcgatatacgagaatccacgttgcgggaagaacaccgagcttctgact
aaccatgcactagttcacttgccaaccacatcaattattctttatgaatacaacattgat
gtcttcaagggacgaaagaagttggaaaagagggaagaagctggaccaatgttttgggaa
attctacaaacggtccccaaccacatctttccaccagccagggattttatctacaacgat
gcgaatttgatttggtcaactaagaaacttccaagtcacgagaacgaagtcagaggtcgg
aatagaaactggttctactataagtacactcgctgcgttgagctgaactctgagctggct
acgaatggtcaggatagtcaactgatttcgacactggtggatgcgattgctacggcgaga
gtcagatggccaaagcaaaccggaaacaagttctctgtcttcaagaaatccatctttcta
ctccaaggccggctggacaaaggagcgttcgccgacgctccagtctttgtaaagcatcgt
aatggagtcgacgcccgcatcggattctcagtggcgatcaaacttaatctcagaattggg
attactgcttgcttcgatgtctcccacacgctgttcactcgtcctggctatccactggtc
cgtcttttctgggaactcatttatggagaaactcttgaaaacgatcagatccttgatgga
gaatgggattcggacatgcagagggcaacaccgacagagagcaatatccaactgatgtcg
agcgtgcttgagaagatgacgctgattttctcccctgaggatggcattacatttgacaag
gagggaaagtgccatcagaccgatttgagaagattgaagtccagaggccgcgagttcaaa
ttctatcaattcgggccaaattcaacttttgagtttttcgatgagagagctagacgcgag
atttcagtcgctgaatattttctggctgcctacaactaccgtattcgctatccaaatctt
ccatgcctccagaaaaagccatccaaaatgaatccacaccgtcttgtgctctatccaatg
gagcttgtcagcttgctagttgatccgattcgttatacgggagccgtcacggagaagctg
aagggggatctcatcaaatacacgactctctccgccgatcaccgtcgtctcgttcttcgg
catgtgattggtcagaaggcaatcggagactgcccacaaatcgtggacaacgaggatcgc
tacatgcagaatcatggaatccgaattggaaaggagatgctcagcgtcaaagcgtgcctt
cttccagctcctgaagtcgtttatggaaacacgacgttcatggatacggagaatcgagga
gagtggaaagctttgactaatgatccgatccgtactgtcctggaggacgctgtctacatg
aggaatcggaatcgaaacgcgccgaagctcaagaagcgtttgttaggatccatcttgaag
atcggctctcctatgaactcaacaggattcgagatagacgactccggttatcaccatctg
atgcgtgccattcacgaggccggacaaccggtctgctggcagattccagagctcggccaa
gcggcaatccaaggaagtacggaatacctccagggtagagacttgcctggaacgatcttg
gattggttcatcagtctcaaaaagaatcttgacgagtacaagcaaagcgaggatgaggtg
atcgttccactggtattcgtgatttttgaagtgcgattcaccacgttgaatcttgaacgc
caggatttccagaacgattacactgaaccgactcttcttctcggcgtcgacgtctcgcat
ccatcgactagggatttgaagggagaggatcatgtcaaacgcttgtcgattgccaccgtt
gtcggaaatattgatctggactgcaccgaatatcgcgcatcgtcgaagattcaagatgtt
ggcgaggagagaatcgttcgattcgagaacgaaattctggaacgaatctgcaattttgtg
caattcaccggcaagcgtccggcccacattgtcatctatagagacggtctttcggaggga
gatttccaaagaacactgtacgaggagaagaggagtgtggaaacggcgtgtcgttcgatt
gctgcagacttcaaccccacactaacctacattgttgtcaccaaacgtcaccataccaga
tttttcctgaaaaatgaggaggaaggattggcagaacaaggatttaatgtccggccggga
accttggtggaagatacggtgaccactaaaaactactatgatttcttcctaaccactcaa
gttggacaaatcggactcgctcgactaacccactactacgtgctacataacgattggaag
gtgccggcaaccttctggccgactgtgacccatgctctcacctacttgttctgccgatca
accagtactgtgaattttccagctcctgtcctctatgctcatctcgcggcgaagaaagcc
aaagaaacgatggatggagcgttatatgccaatgccctcctcggaaagatcctggacacc
tcttcattcgcggaccttgcccaactggaacgatgcatcaagaaccacgaggagctggat
ggcatgacatttgtctga

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