Caenorhabditis briggsae (nematode): CBG_16250
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Entry
CBG_16250 CDS
T01054
Symbol
Cbr-mec-4
Name
(RefSeq) Protein CBR-MEC-4
KO
K03440
acid-sensing ion channel, other
Organism
cbr
Caenorhabditis briggsae (nematode)
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cbr04040
]
CBG_16250 (Cbr-mec-4)
Ion channels [BR:
cbr04040
]
Ligand-gated channels
Acid-sensing ion channel (ASIC)
CBG_16250 (Cbr-mec-4)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ASC
Mec-4_10_cyt
Motif
Other DBs
NCBI-GeneID:
8585548
NCBI-ProteinID:
XP_002643554
WormBase:
CBG16250
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Position
X:1553816..1556729
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AA seq
768 aa
AA seq
DB search
MSWMQNLKNYQHLRDPSEYMSQVYGDPLAYLQENTKFVTEREYYEDFGYGECFNSSESEV
QCELITGEFDPKLLPYDKRLAWHFKEFCYKTSAHGIPMIGEAPNVYYRAVWVMLFLGCMI
MLYLNAQSVLDKYNRNEKIVDIQLKFDTAPFPAITLCNLNPYKASLATSVDLVKRTLSAF
DGAMGKAGGNKEHDGEKEVITEAPTTPAPTTKPSRRRGKRDLSGAFFEPGFARCLCGSQG
SSEQEDKDDEKEEEMHETTTRKPFNINDADEEWDGMEEYDNNEHYENYDVEATTGMNMME
ECQSERTKFDEPTGFDDRCICAFDRSTHDAWPCFLNGTWETTECDTCNEHAFCTKDNKTA
KGHRSPCICAPSKFCVAYNGKTPPIEIWTYLQGGTPTEDPNFLEAMGFQGMTDEVAIVTK
AKENMFAMATLSMQDRERLSTTKRELVHKCSFNGKACDIEADFLTHIDPVFGSCFTFNHN
RTVNLTSIRAGPMYGLRMLVYVNASDYMPTTEATGVRLTIHDKEDFPFPDTFGYSAPTGY
VSSFGLRLRKMSRLPAPYGDCVPDGKTSDYIYSNYEYSVEGCYRSCFQQLVLKECRCGDP
RFPVPEGARHCDAADPVARRCLDARMNDLGGLHGSFRCRCQQPCRQSIYSVTYSPAKWPS
LSLQIQLGSCNGTAVECNKHYKENGAMVEVFYEQLNFEMLTESEAYGFVNLLADFGGQLG
LWCGISFLTCCEFVFLFLETAYMSAEHNYSLYKKKKAEKAKKVASGSF
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgtcatggatgcaaaatttaaaaaactaccaacacctacgggacccctccgagtacatg
tcccaagtgtatggagacccattggcttatcttcaagaaaatacgaaattcgttactgaa
agagagtattatgaagattttggctatggagaatgctttaattcatcggagtcggaagtt
cagtgcgagctaataactggagagtttgacccaaagttgctaccatatgacaaacgtctc
gcctggcacttcaaggagttttgctacaagacatccgctcacggtattccaatgattggt
gaagctccaaatgtgtactatcgagctgtatgggttatgttgttccttggatgtatgatt
atgttgtacctcaatgcacaatccgtgttggacaagtacaatcggaatgaaaagattgtg
gatatccaacttaagtttgatactgctccattcccggctatcactctctgtaatctcaac
ccgtacaaagccagcttagccaccagcgtggatctcgtcaaacgaacattatctgcgttt
gatggtgctatgggcaaagccggagggaacaaagaacacgatggagagaaggaagttatc
acggaggcaccaacaacgccggcaccaacaacaaaaccatcacgtcgccgcgggaaacgc
gatttgtctggcgccttcttcgagcctggattcgcgagatgtctttgcggaagtcaagga
tccagtgagcaagaagacaaggacgatgagaaagaggaggagatgcatgaaacgaccact
aggaagccattcaatattaatgatgccgatgaggaatgggatggaatggaagagtatgac
aacaatgagcattatgagaattacgatgtcgaagcgacgactggaatgaacatgatggag
gagtgccaatcggaaagaacgaaattcgacgagcccactggattcgacgatcgctgtatt
tgcgcgtttgacagatctactcatgatgcatggccttgctttttgaatggaacctgggaa
acaacagaatgcgacacctgtaacgagcatgctttctgcacaaaagacaacaaaactgca
aaaggccatcgttccccatgcatttgtgctccatcgaagttctgtgtcgcatataacggc
aaaactccaccaattgaaatctggacgtacctgcaaggaggaacaccaaccgaagatccg
aatttcttagaagctatgggttttcaaggcatgaccgatgaggtggcaattgttaccaag
gcaaaagaaaacatgtttgcaatggcaactctttctatgcaagatcgagagagattgagc
acaactaaaagggagctggtgcacaagtgttcctttaatggaaaagcctgtgatattgag
gctgatttcttaacccatattgatcctgtatttggctcttgctttactttcaaccataac
cgaactgtcaatctgactagtattcgtgctggtcccatgtacggattacgtatgcttgtc
tatgtcaatgcttctgattacatgccaaccactgaagctactggggtccgattgactatt
catgacaaagaagacttcccattccctgacacattcggctactctgccccaactggatat
gtgtcgtcgttcggcttgagattgagaaaaatgtctcgattaccagcaccatacggtgat
tgtgtgccagatgggaaaacttccgactacatctatagtaactatgagtactccgtcgag
ggttgctaccgctcctgcttccaacaactggttcttaaagaatgcagatgtggtgatccc
aggttcccagttccagaaggtgcgagacattgtgacgccgctgatcctgttgcaagaaga
tgcctggacgctagaatgaatgatctcggaggtcttcatggatccttccgttgcagatgt
caacaaccgtgtcgccaatcaatttactctgtgacatactctccggcaaaatggccatcg
ctatctcttcaaatccagctgggatcgtgtaatggtactgcggtggagtgcaataagcat
tacaaagagaacggcgcaatggttgaagtgttctatgaacagctcaatttcgaaatgctc
accgaatctgaggcttatggattcgtcaacttgttagctgatttcggtggacagttgggt
ctctggtgcggaatctctttcttgacatgttgcgaattcgttttcctgtttctggagact
gcttacatgagcgccgagcacaattactctctatataagaagaaaaaagcagaaaaagcc
aagaaagtggcttccggatctttctaa
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