Caenorhabditis briggsae (nematode): CBG_16487
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Entry
CBG_16487 CDS
T01054
Symbol
Cbr-rpn-6.1
Name
(RefSeq) Protein CBR-RPN-6.1
KO
K03036
26S proteasome regulatory subunit N6
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
CBG_16487 (Cbr-rpn-6.1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
cbr03051
]
CBG_16487 (Cbr-rpn-6.1)
Proteasome [BR:
cbr03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
non-ATPase subunits
CBG_16487 (Cbr-rpn-6.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPN6_N
PCI
RPN6_C_helix
DDRGK
Motif
Other DBs
NCBI-GeneID:
8583814
NCBI-ProteinID:
XP_045095978
WormBase:
CBG16487
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Position
III:complement(7389910..7391398)
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AA seq
404 aa
AA seq
DB search
MDTMTSLPHQNDQNVIRHLTNLVKSPASGDDDIKKKEDSIMELGNILAQNKQTEELRKMI
EQTRPFLVSLGKAKAAKLVRDLVDLCLKIDDQDGDIKVGLVKECIQWATEQNRTFLRQTL
TARLVRLYNDLQRHTQALPLAADLIRELKKVDDKDVLVEVELEESKAYYNLANIGRARAS
LTGARTTANAIYVNPRMQSALDLQSGILHAADEKDFKTAFSYFYEAFEGYDSVDEKSAAL
TALKYMLLCKQSSVRKTCLKVQWIYLEAMKAIAAAAQKRSLKDFQAAFGAFPQELQMDPV
VRKHFHSLSERMLEKDLCRIIEPYSFVQIDHVAQQIGIDRSKVEKKLSQMILDQKLSGSL
DQGEGMLIVFDIATPDEAYQTALDTIHAMGEVVDALYSNASKIN
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atggatacaatgacttcgcttcctcatcaaaatgatcaaaatgtcattcgacacctcacc
aatcttgtcaaatcaccagcatccggagatgatgacattaagaagaaggaagattctatc
atggaactcggaaacattctggctcaaaataagcaaactgaggaattgcggaaaatgatt
gagcaaaccagaccattcttagtctcattgggaaaagcgaaagctgctaaacttgttcgc
gatcttgtcgatttgtgtctcaagattgatgatcaggatggagatatcaaagtcgggctt
gtaaaagagtgcattcaatgggcgactgagcaaaaccgtactttccttcgacaaactcta
accgctcgtttggttcgtctctacaacgatcttcagagacatacccaggcacttccactc
gctgctgatttaattcgagagctgaaaaaggtcgatgataaagatgtgcttgtggaagtg
gaactcgaagagagcaaagcgtattacaacttggctaacatcggtcgtgctcgtgcttct
ctcactggggctcgtacaactgcaaatgctatctatgtgaatccacgaatgcaatccgct
cttgatcttcaatctggaattcttcatgcagcagacgaaaaggacttcaaaactgcgttt
tcgtatttctatgaagctttcgaaggatacgattcagtcgatgagaagagcgctgcactt
actgctctcaagtacatgcttctgtgcaagcagtcttctgtccgcaaaacttgccttaaa
gtacagtggatctatttggaagctatgaaagctatcgcagcggccgcccaaaaacgatct
ctaaaagatttccaagcagcctttggcgcattcccacaagaattgcaaatggatccagtc
gttcgaaaacatttccattcgttaagcgaacgaatgcttgagaaagatttgtgtcgtatt
attgagccttattcgtttgtgcagattgatcacgttgctcaacaaatcggaatcgatcga
tccaaggtggagaaaaaactttctcaaatgattctcgaccaaaagctatccgggtcgctc
gaccaaggtgagggtatgctcattgtctttgacatcgccactcctgatgaggcttatcaa
acagcgttggacacaattcatgctatgggagaagtcgttgatgccctctacagtaatgct
tcaaagattaattga
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