Caenorhabditis briggsae (nematode): CBG_16500
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Entry
CBG_16500 CDS
T01054
Symbol
Cbr-lgc-38
Name
(RefSeq) Protein CBR-LGC-38
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr04080
Neuroactive ligand-receptor interaction
cbr04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
CBG_16500 (Cbr-lgc-38)
04082 Neuroactive ligand signaling
CBG_16500 (Cbr-lgc-38)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cbr04040
]
CBG_16500 (Cbr-lgc-38)
Ion channels [BR:
cbr04040
]
Ligand-gated channels
GABA-A
CBG_16500 (Cbr-lgc-38)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
8583825
NCBI-ProteinID:
XP_045095983
WormBase:
CBG16500
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Position
III:complement(7432635..7441398)
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AA seq
461 aa
AA seq
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MTTWILLSLFLIGVVITEHPPLIKSDKLIEYAPQASTEPTLGDQSNENLENNVTRLLDKL
IASHDRRIRPNYGGPPIEVNITAHVTTISAVSEVSMDYTLDLYLRQIWKDPRLAWESDVE
DSLTIGIDMVKTIWTPDTFFPNEKKSFFHEATSHNSFLRIDSHGNVLRSIRLTVTANCPM
SLHTFPLDRQECALEVESYGYSTKDIIYHWHGANAVTIDENVHLAHFTIGEHYHIERTIS
LSTGNYSRLTAYFMFKRNIGFYLIQIYFPSSLIVVISWVSFWLNREAVQARVAIGVTTVL
TMTTLMTSTNASLPKVSYVKSLDVFLGVCFFIVFASLLEYAAIGYLMKRNRSVPAASPVQ
YYETGDGVLKREASRKKSRNRRDSSMKNYQNNNIHHRPSDGHVDQRIPLLSMVPMPPIPF
KPQNGAWGKVRPAQVDLFSRFAFPIFFVIFHIIYWTYYINQ
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgactacgtggattttactgtcgctattcttgattggtgttgttatcactgaacatcca
ccgctgattaaaagcgacaaactgattgagtatgcaccacaagcaagtacagaaccaaca
ttaggggatcaaagcaatgagaatctggagaacaatgtgacgaggttactggacaaattg
atagcaagtcatgatagaaggattcgaccgaattatggaggccccccgattgaagtgaat
ataactgcacacgtcacaacaatcagtgcagtttcagaagtctctatggattacactctt
gatttgtaccttcgtcaaatttggaaagatcctagattagcatgggaatcagatgtggaa
gattcgctcacaatcggaattgatatggtaaaaacaatctggacacctgacactttcttt
ccgaatgagaagaagtcgttctttcatgaagccacgtcacataactcgtttcttcgaatc
gatagtcatggaaatgttttgagaagtattcgattgacagttacagcaaactgcccaatg
agtctgcatacgttcccattggatcgtcaagaatgtgctttggaggtcgagagttatgga
tactcgacaaaagatatcatctaccattggcatggtgcaaatgcagtcaccattgatgag
aatgtgcatttggcacatttcacaattggagaacactatcatattgaaagaacaattagt
ttgtcgactggaaattattcaagattaaccgcttattttatgttcaaacggaatattgga
ttctatttaatacagatctacttcccatcgtctctgattgtcgtcatctcttgggtatcg
ttctggttgaatcgagaagccgtgcaagcaagagtggctattggagttactactgttttg
accatgaccactttgatgacaagtaccaatgcatcacttcccaaagtgtcctatgtaaag
tcattggatgtctttctgggtgtttgcttctttattgtttttgcttccctactggaatat
gctgcaattggatatctaatgaaacgaaatcgaagtgttccagcagcttctccagtccaa
tattatgaaacaggcgacggagttctaaaaagagaagcaagccgaaagaaaagcagaaac
cgtcgagacagctcaatgaagaattatcagaacaacaacattcatcaccgtccatcagat
ggacatgtcgatcaacgtattccactcctttccatggttccaatgccaccgatcccattc
aaaccacaaaatggagcatggggaaaagtgagacctgctcaggtggatctgttctctcgc
tttgcatttcccatcttctttgtaatattccatatcatctactggacatactacatcaac
caataa
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