KEGG   Caenorhabditis briggsae (nematode): CBG_16526
Entry
CBG_16526         CDS       T01054                                 
Symbol
Cbr-larp-1
Name
(RefSeq) Protein CBR-LARP-1
  KO
K18757  la-related protein 1
Organism
cbr  Caenorhabditis briggsae (nematode)
Brite
KEGG Orthology (KO) [BR:cbr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cbr03019]
    CBG_16526 (Cbr-larp-1)
Messenger RNA biogenesis [BR:cbr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     CBG_16526 (Cbr-larp-1)
SSDB
Motif
Pfam: LARP1_HEAT La Beta-prop_SCAP
Other DBs
NCBI-GeneID: 8583846
NCBI-ProteinID: XP_045095991
WormBase: CBG16526
LinkDB
Position
III:7527395..7535074
AA seq 1159 aa
MAEKQPMLSFAKVVSGQAEEGLSQSQQPPQKQSNTSPSTQNEQIPTEKQGNSQSTRRDKE
NSSGRQSDRPRGEGKGKRRNNKKGERKPRGEAKTEKSVEKVVTEEAKPVEVPVVLEPAPL
PAINAWFKNKEEAAAAADREGQNVDPAALPVASPIQKAQKSVAPVPEKKKAIESVPAIKE
KPKNREAKKEPWKTSDAGTDSSNTETVTVAAPQEWPSLAKSELNGHVSPSNSSEIKNFCS
FRDITVNDDNNEGGSSSQHKTTGKTTKNSWKKVEISVDYGSKGKGASRGNGEKGTRRTAN
DETARRRSGEEDSASGDEQQYWSRNKDNKSPVNEMSNDRVVDSGSNGIYYQQGGTHGWKK
KVNNKSGSDLPTPPNSTSPQHSEESSPEHVSKDKSSLNMNGNARNAPPVNRTGNSTVAPK
TGDYWHKNGGERKDDKSQPKAYYQRNDRYQARANPHAPPKLTPAQRKERGPLPRWEDIEA
GEDNFDYMTLMEAQYSQYYGAPQQFEHQLDPHQASILIQQAQQHMASFAPFRPPMPMISP
NLMSPPMDRDGGIPSPMSNGEPINTSIPFAPIYHPPAPPRPVTDDTLKEYVRKQIEYYFS
EDNLQKDFFLRRKMSPEGYLPVALIASFPRVRALTEDFSLIGEALKDSTKVEVSSDNVQI
RARENPTAWPLMPPVSGAADSLPGPSTQAPNQFKQNGPLAQSAQTSVPTEHQTQNQASSS
QTQQPQQQEQWEEVKSRKGKGKGRLASGSQSANDSKRQSQKSSQQSASDQPDLDFQFDNE
ISQTPKRVEKSKKTLLSAMDSEEIGDDVISKLIIMTPSRRTLDRTGDFSTRSQNQVEFNE
EVEIGLRRYEEELWTVPLEKEAPTSKVSTISAEQFHQMRGDTDSKQNPEEPPEIPLPTGT
QPTPDSVWTKKAKERAAASVTVPKSPMQRRESQEQKMNRFYPVSKPAATLDAKSPRKKKT
RHSEKPPVEMPVAWVLGREEALPAAPIGIAASSSQVPANHPSVSLLQEDRFVQNVYSTWR
LSCLKQRKSLGYDCAEMNTLYRFWSFFLRDNFNRNMYEEFRKLALEDAEIGSRYGIEALF
RFYSYGLEKKFRPEIYKNFMKDCTTDVQKGELYGLEKLFAFLQRSKIAKQLVVDDFLTNE
LNKYKSTDDFRNLPLSTKK
NT seq 3480 nt   +upstreamnt  +downstreamnt
atggccgagaagcagcccatgctctcattcgcaaaagtagtgtccgggcaggccgaagag
ggcctgtctcaatcacagcaacctccacaaaaacagagcaacacttcaccttctacacaa
aacgagcagatcccaaccgagaagcaaggaaattcacagagcactagacgcgataaagaa
aactccagtggacgccaatctgatagacctcgcggagaaggaaaaggaaaacgacgcaac
aataaaaaaggtgaacgcaagccaagaggcgaagcaaaaactgaaaagtcggttgaaaaa
gttgtgacagaagaagcgaagcctgtcgaggtcccggttgttttagagccagctccactg
ccagccataaatgcttggttcaaaaataaagaagaagcagccgctgctgctgatcgagaa
ggccagaacgtagacccagccgcgttaccggtggcttctccgatccaaaaagctcaaaaa
tcggttgctccagtcccagagaaaaagaaggctatagaatccgtcccagcgatcaaagaa
aaaccaaagaacagagaagcaaaaaaggaaccttggaaaacatcagatgctggaacagac
tcttcaaacacagaaacagtgacagtcgctgctcctcaagaatggccatcattggctaag
tcagagctcaacggccatgtttcaccatctaactcatcggaaattaaaaacttttgttca
tttcgcgacataactgtaaatgatgataacaacgagggaggaagcagctcgcaacacaaa
acaactggaaagacaacaaaaaatagttggaagaaggttgagatatcggtagattatgga
agcaaaggaaagggagcctctcgcggaaatggagagaaaggaaccagacgcactgctaac
gatgaaactgctcggcgacgatccggagaagaggactctgcgagtggcgatgagcagcaa
tactggtctcgcaacaaagacaacaagagtccagtgaacgagatgtcgaatgatcgggtc
gtggattccggatcgaatgggatatactaccaacaaggtggtactcacggttggaaaaag
aaagtgaataataagtctggatcagatttacctacacccccaaactcgacttctccacaa
cacagtgaagaaagttcacctgagcacgtatcgaaagacaagtcttctctgaatatgaac
ggcaacgctagaaacgcaccgccagtcaatcggaccggaaattctactgtcgccccaaaa
acaggtgattattggcataaaaatggtggtgagcgcaaggacgacaaatctcaaccgaag
gcttactatcaacgcaacgatagataccaggctcgcgcaaatcctcacgctccgccaaaa
ttgacccctgctcagcgaaaggaacgaggacctcttccacgctgggaagacattgaagct
ggagaggacaactttgattacatgactttgatggaggctcagtactctcagtattatggt
gctccgcagcaatttgagcatcagttggatccacatcaagctagcatcctcattcaacaa
gctcaacaacatatggcttcgttcgctccgttccgtccacctatgccaatgatctctcca
aatttgatgtctcctccaatggatcgtgatgggggtattccttctccaatgtctaatgga
gagcccataaatacatcaattccgtttgctccgatttatcatcctcccgcaccaccacgc
ccggtaactgatgataccttgaaggaatatgtcaggaaacaaattgagtactacttttcc
gaagacaacctgcagaaagacttcttccttcgtcgaaaaatgtctccagaaggttatctt
ccggtggctttgatcgcttctttccccagagttcgtgctctcacagaggacttttctttg
attggtgaagcactcaaagattctacaaaggttgaagtttcatccgacaatgtgcaaatt
cgtgcacgcgagaacccgactgcttggcctttgatgcctcctgtcagtggagcagctgat
tcactaccaggaccatccacccaggcaccaaatcagtttaaacagaatggaccactggca
caatctgcacagacatcggttccaacagaacaccaaacacaaaaccaagcgtcatcgtca
cagacacaacaaccacaacaacaggaacagtgggaagaagtgaaatcacgaaaaggcaaa
ggaaaaggaagattggcttcaggatcacaatctgcgaatgacagcaaacgccaatcacaa
aaatcgtcacagcagagtgcatcagaccaacccgatttggattttcaatttgacaatgag
atttcccaaactccaaaacgagttgaaaaatcgaagaaaactcttttgagcgctatggac
tccgaagagatcggagatgatgtgataagtaaactgatcatcatgacaccatcaagacga
acactggatcgtactggtgacttttccacaagatcccaaaatcaagttgaattcaatgaa
gaagtagaaattggtcttcgaagatatgaagaagaactttggacagttcctcttgaaaaa
gaagcaccgacatccaaggtttccacaatttcggctgagcagtttcatcagatgcgtgga
gatactgattccaagcaaaatcctgaagaacccccagaaatccctcttcctactggaact
caaccaactccagattcggtgtggactaaaaaggctaaagaacgagcagctgccagtgtt
actgtgccaaagtcaccgatgcagcgccgtgaatcccaggaacagaagatgaatcgtttt
tatccagtttccaagccagcagctacgttggatgccaaatcaccacgcaaaaagaagact
cgtcacagtgagaagccaccagtagaaatgccagtcgcctgggttcttggacgtgaagag
gctttgccagctgctccaattggaattgctgcgagctcatcgcaagtacctgctaatcat
ccgtctgtcagccttctccaagaagatcgatttgtacaaaatgtttattcaacttggcgc
ttgtcgtgcctgaagcaacgcaaaagccttggatacgattgtgcggaaatgaacacgctg
taccgtttctggtctttcttcctgcgagataacttcaatagaaacatgtatgaggaattc
cgcaagttggctcttgaagatgcagagataggatcccgttatggaattgaagcattgttc
cgattctacagttacggcttggaaaagaagttcagaccggaaatctacaaaaacttcatg
aaggattgcacaactgatgtgcagaaaggagaactctacggccttgagaagcttttcgct
ttcttacagcgatctaaaatcgccaaacaattggttgtcgatgatttcttgacgaacgag
ttgaataagtacaagtcaacagatgatttcagaaatcttccattgtcaacaaagaagtaa

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