Caenorhabditis briggsae (nematode): CBG_16670 Help Entry CBG_16670         CDS       T01054                                  Symbol Cbr-prp-8 Name (RefSeq) Protein CBR-PRP-8   KO K12856   pre-mRNA-processing factor 8 Organism cbr  Caenorhabditis briggsae (nematode) Pathway cbr03040   Spliceosome Brite KEGG Orthology (KO) [BR:cbr00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     CBG_16670 (Cbr-prp-8)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:cbr03041]     CBG_16670 (Cbr-prp-8) Spliceosome [BR:cbr03041]  Complex B   U4/U6.U5 tri-snRNP components    U5 snRNP specific factors     CBG_16670 (Cbr-prp-8)  Complex C    U5 SnRNP specific factors     CBG_16670 (Cbr-prp-8) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  PROCN PRP8_domainIV U6-snRNA_bdg PRO8NT U5_2-snRNA_bdg PROCT RRM_4 JAB Motif Other DBs NCBI-GeneID:  8583958 NCBI-ProteinID:  XP_045096031 WormBase:  CBG16670 LinkDB All DBs Position III:complement(<8128872..>8138197) Genome browser AA seq 2464 aa AA seqDB search MADHGGPPQTEPHAIPDSILEEKSRKWKQLQGKRYSEKKKFGMADTQKEEMPPEHVRKVI RDHGDMTSRKYRHDKRVYLGALKYMPHAVLKLLENMPMPWEQIRDVKVLYHITGAITFVN DIPRVIEPVYMAQWGTMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYADNILDVEPLEP IQMELDPEEDGAVAEWFYDHKPLATTRFVNGPTYRKWAFSIPQMSTLYRLANQLLTDLVD DNYFYLFDMKSFFTAKALNVAIPGGPKFEPLVKDLHTDEDWNEFNDINKVIIRAPIRTEY RIAFPFMYNNLISSLPVQVSWYHTPSVVFIKTEDPDLPAFYYDPLINPIVLSNLKATEEN LPEGEEDDDWALPEDVRPIFEDVPLYSDNTANGLALLWAPRPFNLRSGRTRRAVDVPLVK SWYREHCPAGMPVKVRVSYQKLLKVFVLNALKHRPPKPQKRRYLFRSFKATKFFQTTTLD WVEAGLQVLRQGYNMLNLLIHRKNLNYLHLDYNFNLSQEILRLTKLVVDAHVQYRLNNVD AYQLADGLQYIFAHVGQLTGMYRYKYKLMRQVRMCKDLKHLIYYRFNTGPVGKGPGCGFW APGWRVWLFFLRGITPLLERWLGNLLSRQFEGRHSKGVAKTVTKQRVESHFDLELRAAVM HDILDMMPDGIKQNKARVILQHLSEAWRCWKANIPWKVPGLPTPVENMILRYVKAKADWW TNSAHYNRERVRRGATVDKTVCKKNLGRLTRLYLKSEQERQHNYLKDGPYISAEEAVAIY TTTVHWLESRRFSPIPFPPLSYKHDTKLLILALERLKESYSVKNRLNQSQREELALIEQA YDNPHEALSRIKRHMLTQRAFKEVGIEFMDLYTHLIPVYDIEPLEKVTDAYLDQYLWYEA DKRRLFPSWVKPGDTEPPPLLTYKWCQGLNNLQDVWETSEGECNVIMETKLEKIAEKMDL TLLNRLLRLIVDHNIADYMTSKNNVLINYKDMNHTNSFGIIRGLQFASFIVQFYGLVLDL LVLGLRRASEIAGPPQCPNEFLQFQDVATEIGHPIRLYCRYIDRVWIMFRFSADEARDLI QRYLTEHPDPNNENIVGYNNKKCWPRDARMRLMKHDVNLGRAVFWDIKNRLPRSITTVEW ENSFVSVYSKDNPNMLFDMSGFECRILPKCRTANEEFVHRDGVWNLQNEVTKERTAQCFL KVDEESLSKFHNRIRQILMSSGSTTFTKIVNKWNTALIGLMTYFREAVVNTQELLDLLVK CENKIQTRIKIGLNSKMPSRFPPVVFYTPKEIGGLGMLSMGHVLIPQSDLRWMQQTEAGG VTHFRSGMSHDEDQLIPNLYRYIQPWEAEFVDSVRVWAEYALKRQEANAQNRRLTLEDLD DSWDRGIPRINTLFQKDRHTLAYDKGWRVRTEFKAYQILKQNPFWWTHQRHDGKLWNLNN YRTDMIQALGGVEGILEHTLFRGTYFPTWEGLFWERASGFEESMKFKKLTNAQRSGLNQI PNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMHGKIPTLKISLIQIFRAHLWQKIHESV VMDLCQVFDQELDALEIQTVQKETIHPRKSYKMNSSCADVLLFAQYKWNVSRPSLMADSK DVMDNTTTQKYWLDVQLRWGDYDSHDVERYARAKFLDYTTDNMSIYPSPTGVLIAIDLAY NLYSAYGNWFPGMKPLIRQAMAKIIKANPAFYVLRERIRKGLQLYSSEPTEPYLTSQNYG ELFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAG QKRLSQLAKWKTAEEVAALIRSLPVEEQPRQIIVTRKAMLDPLEVHLLDFPNIVIKGSEL MLPFQAIMKVEKFGDLILKATEPQMVLFNLYDDWLKTISSYTAFSRVVLIMRGMHINPDK TKVILKPDKTTITEPHHIWPTLSDEDWIKVELALKDMILADYGKKNNVNVASLTQSEVRD IILGMEISAPSQQRQQIADIEKQTKEQSQVTATTTRTVNKHGDEIITATTSNYETASFAS RTEWRVRAISSTNLHLRTQHIYVNSDDVKDTGYTYILPKNILKKFITISDLRTQIAGFMY GVSPPDNPQVKEIRCIVLVPQTGSHQQVNLPTQLPDHELLRDFEPLGWMHTQPNELPQLS PQDVTTHAKLLTDNITWDGEKTVMITCSFTPGSVSLTAYKLTPSGYEWGKANTDKGNNPK GYMPTHYEKVQMLLSDRFLGYFMVPSNGVWNYNFQGQRWSPAMKFDVCLSNPKEYYHEDH RPVHFHNFKVIINLSVDHQEPRHWKNDDLGQTKRQENEQMSAVVVAEKLRISMRIASSFF LYCKNAFLFRPHAAIPLFFITWKISRAASRSSFKALPQKHYGKYGSIPTPEISVALSHKL QYPWERETSKLPKPLSFPNSFYFVFVQRIPQNSFFCLTLSSSLPINHVFRQHLSFSTSSA SDSF NT seq 7395 nt NT seq  +upstreamnt  +downstreamnt atggccgatcacggtggtccgcctcagaccgagcctcatgcgattccagattcgattctg gaggaaaaatcgcgaaaatggaagcaactgcaaggaaaacggtattcagagaagaagaag tttggaatggctgacacacaaaaggaagaaatgccacctgagcatgttagaaaagttatc agagatcatggagatatgacttctcgcaaatatcgtcatgataaaagagtttatcttgga gctctcaagtatatgccacatgcagtactgaaactcctagaaaacatgccgatgccttgg gagcaaatccgagatgtgaaagttttatatcacatcactggagctattacgttcgtaaac gacattcctcgagttatcgaaccggtttacatggctcaatggggaacaatgtggatcatg atgagaagagaaaagcgtgatcgtcggcatttcaaacggatgaggttccctccattcgat gatgaagaaccaccacttgattatgctgacaatattcttgatgtggagccattggagcca atccagatggagcttgatccggaagaagatggcgccgttgctgaatggttctatgatcat aaaccgttagctaccactcgttttgtgaatggaccgacatacaggaaatgggcattcagt attcctcaaatgtcaactctctatcgtcttgctaatcagttactgaccgatttagtagat gataattatttttatttattcgacatgaagagtttcttcactgccaaagcactcaatgtg gccatccccggaggtccgaaattcgagccattggtgaaggatttgcacacggatgaagat tggaatgaattcaatgacataaataaagtaattattcgagctcctatccgcacggaatac agaattgctttcccattcatgtacaacaatttgatcagctcgttgccggttcaggtttct tggtaccacacgccgtccgttgtgttcatcaaaactgaagatcctgatttaccagcattc tactatgatccattgatcaatccgattgtattaagtaatctgaaagctacagaggaaaat ttgccagaaggagaagaagatgatgattgggcactcccagaagacgtcagaccaattttt gaagacgttcctctttattctgataacacggcgaatggtttagcacttctttgggctcca cgtccattcaacttgcgatccggaagaacaagaagagctgtggatgttccattagtgaag tcatggtaccgagaacattgccccgccggaatgcccgtaaaggtgcgcgtatcttatcag aagcttctcaaagtctttgttctcaatgcactcaagcaccgtccaccaaagcctcaaaaa cgtcgctatttgttccgttcattcaaagctacgaagttcttccaaactacgactctcgat tgggtggaagcaggattgcaagttctccgtcaaggttacaacatgctcaatcttctcatt catcgaaagaatctcaactatcttcatcttgactacaatttcaatctgagccaagaaatc ttgcgtctcacgaagctagttgtagatgctcatgtccagtatcggttaaacaatgtggac gcctatcagttagctgatggactccaatacatttttgcacacgtcggtcagctgacagga atgtatcgttacaagtacaaactaatgagacaagtgagaatgtgcaaagatctgaagcat ttaatctactatcgtttcaacactggaccagtcggcaaaggtcccggatgtggtttctgg gcacctggatggagagtttggttgttcttcctccgaggaatcacgccgcttttggaaaga tggcttggtaatctcctttctcgacagttcgaaggtagacattcaaagggtgttgccaag acagtcaccaagcagagagtcgagtctcacttcgatcttgagcttcgtgccgcagttatg cacgacattttggatatgatgccagatggaatcaaacaaaacaaggctcgtgttattctg caacatctctccgaagcatggcgttgctggaaagctaacattccttggaaagttcctgga ctaccgacacctgttgaaaatatgattcttcgatatgtgaaggcaaaggcggattggtgg acgaactctgcccattacaacagagaacgtgttagacgaggagctactgtcgataagact gtgtgcaagaagaatttgggacgactgacgagattgtatttgaaatccgaacaagaaaga caacacaactatctcaaggatggtccatacatctcggccgaagaagctgtcgcgatttat acaacaaccgtccattggctggagtcacgacgattctctcctatcccattcccaccgctt tcctacaaacacgatactaagctgttgattctagctttggaaagactgaaggaaagctac agcgtcaaaaatcgtttgaaccagtcacaaagagaagagttggccttgattgagcaggct tatgacaatcctcacgaagctctatctcgtatcaagagacacatgctcacgcaacgtgca ttcaaggaagttggaattgagttcatggatctctacactcatctgattcccgtttacgat attgagccattggagaaggttacggatgcctacctcgatcagtacctctggtatgaagct gataagagaagattattcccatcgtgggtcaagccgggtgacacagaaccgccaccattg ctcacctacaagtggtgccaaggactcaataatcttcaagacgtgtgggagacaagtgaa ggagaatgtaacgttataatggagacaaagttggagaaaatagctgagaagatggatttg acgttgctaaatagacttctgagactgatcgtggatcacaatattgctgattacatgaca tccaagaacaacgttcttatcaactacaaggatatgaatcatacaaactcctttggaatc atccgcggtcttcaatttgcttcattcattgtccaattctatggactagttctcgattta cttgtcctcggtcttcgacgtgcttcagaaattgctggaccaccacaatgtccgaacgag ttcctacaattccaagacgttgccaccgaaatcggccatccaattcgtctttattgccgt tacattgaccgagtgtggattatgttccgcttcagtgctgatgaggctcgtgatctgatt caacgttatctgacagagcatccagatccaaataacgagaatattgttggatacaataac aagaagtgttggccaagagatgcacgaatgcggctgatgaaacatgatgtcaacttggga agagccgtgttctgggacatcaagaatcgtttgcctcgttccatcacaaccgtcgagtgg gagaattcatttgtgtctgtctacagtaaggacaacccgaacatgctcttcgatatgtcc ggattcgaatgtcgcattcttccaaaatgtcgtaccgcaaatgaagaattcgtccatcga gatggtgtttggaatcttcagaatgaggttactaaggaaagaactgctcaatgcttcctg aaagtggacgaagagtcgctttccaagttccacaacagaattcgacaaatcttgatgtct tcgggatcaactaccttcacgaaaattgtcaacaaatggaatactgcacttatcggtttg atgacctacttcagagaagccgtggtcaacacacaagaacttctggatctgctggtgaaa tgtgaaaacaagattcaaactagaatcaagattggactgaactcgaaaatgccttcccgt ttcccacctgttgttttctatacaccaaaagaaatcggaggacttggaatgctctcaatg ggacacgttctgattcctcagtcagatctcagatggatgcagcaaacagaagcaggaggt gtcactcacttccgttcgggaatgagtcatgacgaagaccagttgattccaaatctgtac agatacattcagccgtgggaagctgagttcgtggactcggttcgtgtttgggcagaatat gccttgaagagacaagaagcgaatgcccagaacagaagacttacgctggaagacctcgac gattcatgggatcgtggaattccgagaatcaatacactgttccaaaaagaccgacacact ttggcctacgataagggatggcgtgtgagaacagaattcaaggcctaccaaattttgaag cagaatccattctggtggactcatcagagacacgacggaaagctatggaacttgaacaac tacagaaccgacatgattcaggcgcttggaggagtagaaggaattctcgaacatacatta ttcagaggaacctatttcccgacatgggaaggactgttctgggaacgtgcttctggattc gaagaatctatgaaattcaaaaagctcaccaacgctcaacgatctggtctcaaccaaatt ccgaaccgtcgttttactctctggtggtctcccactatcaaccgtgcaaatgtctacgtc ggtttccaagtacaactggatctcacaggaattttcatgcacggaaagattccaacactg aagatttcactcattcaaatcttccgtgctcacttgtggcagaagattcacgagtcggta gttatggatctgtgtcaagtgttcgatcaagaacttgatgcacttgagattcaaactgtg cagaaagaaactatccatccaagaaaatcgtataagatgaacagttcttgtgccgacgtg cttctgttcgctcaatataaatggaatgtttcgagaccgtcgttgatggcagatagcaag gatgttatggacaataccaccacgcaaaagtactggcttgatgttcaactccgttgggga gattacgattctcacgatgtggaacgttatgcacgtgccaaattccttgactataccact gacaacatgtccatctatccatcaccaaccggagttctcatcgctatagacctggcgtac aatttgtactcggcatatggaaactggttccctggaatgaaacctctgattcgacaagct atggctaagatcatcaaagccaatccagccttctacgtgcttcgtgaacgtattcgcaag ggattgcagctctactcgtctgaacctaccgagccatatttgacaagtcagaactatgga gaattgttcagtaaccaaatcatctggttcgtcgatgataccaatgtgtaccgtgtcacc attcacaagactttcgagggtaacttgacaacaaagccaatcaacggagctattttcatc ttcaacccacgtactgggcagcttttcctgaaaatcattcatacttccgtatgggctggt cagaaacgtttgtctcaattggccaaatggaaaactgctgaagaggttgctgctttgatt cgctcattgccagttgaagaacaaccacgtcaaatcatcgtcaccagaaaagctatgctc gatccattggaggtgcatcttctcgatttcccgaacattgtcatcaagggatccgagctt atgcttccattccaagctatcatgaaagttgagaagtttggagatttgattctgaaggca accgaaccccagatggtactcttcaatttgtacgatgactggctgaagactatctcgtca tatactgcgttctctcgtgttgtactgatcatgcgtggaatgcatatcaatccagacaag actaaagtgattctgaaacctgacaagaccacaatcacggaacctcatcacatttggcca acactttctgacgaagactggatcaaagtggagctggcgttgaaggatatgattctggct gattacggaaagaagaacaatgtcaatgttgcttcgttgactcaatccgaagtgagagat attattctcggtatggaaatttcggcaccaagtcagcaacgtcaacagattgctgacatc gaaaaacagacgaaagaacaaagtcaagtgaccgccacaacaacacgaactgtgaacaaa cacggagatgagattattacggctacaacatctaactacgaaacagcttcattcgccagt cgaactgagtggagagttcgtgccatctcttcgaccaatcttcatctccgtactcagcat atctatgtgaactctgatgatgtgaaagataccggttacacttatatcctaccaaagaat atactcaagaagttcatcactatctccgatcttcgtacccaaatcgctggtttcatgtat ggagtttcaccgcccgacaacccgcaggttaaggaaatccgttgcattgttcttgttcca caaacaggaagtcatcagcaagtaaatctacccacgcagcttccggatcacgaactgctt cgtgatttcgagccactcggatggatgcatacccagccaaatgaacttccacaattgtct ccacaagacgtaacaactcatgcaaagcttctcaccgataacatcacttgggacggagaa aaaactgtgatgattacatgcagtttcactcctggctctgtttctctcaccgcgtataag ctgactccatctggatacgaatggggcaaggccaatacggataagggaaataatccaaaa ggatacatgccaacccattacgaaaaggtgcagatgcttctatcagaccgtttccttgga tacttcatggtcccatccaacggtgtctggaattacaatttccaaggacaacgctggtcg cctgccatgaagttcgacgtctgtctttctaatcctaaagaatattaccatgaagatcat cgcccagttcacttccacaatttcaaggtaatcataaatttatccgtagatcatcaagaa ccgcgacattggaaaaatgatgatcttgggcaaacaaagcgacaagaaaacgagcaaatg tcagctgtcgttgtagcggagaaactgagaatctctatgagaatagcctcatcttttttt ctctattgcaaaaatgcctttttgtttcgtccgcacgccgccattccgttgttctttatt acctggaaaatttcgcgggcggcttcccggtcaagtttcaaggccttgccccaaaaacac tacggtaaatacggtagtattccaacgccagaaatctcagtagccctctctcataagcta cagtacccctgggaacgagaaacttcaaaacttccaaaacccctttccttcccaaattct ttttactttgtttttgtccaaagaataccacaaaactcatttttctgtctaaccctttca tcatctctgccaatcaatcatgtcttccgccaacacctttctttttccacgtcttctgct tctgactcgttttga

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