Caenorhabditis briggsae (nematode): CBG_16674
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Entry
CBG_16674 CDS
T01054
Symbol
Cbr-atg-13
Name
(RefSeq) Protein CBR-ATG-13
KO
K08331
autophagy-related protein 13
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr04136
Autophagy - other
cbr04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
CBG_16674 (Cbr-atg-13)
04136 Autophagy - other
CBG_16674 (Cbr-atg-13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cbr04131
]
CBG_16674 (Cbr-atg-13)
03029 Mitochondrial biogenesis [BR:
cbr03029
]
CBG_16674 (Cbr-atg-13)
Membrane trafficking [BR:
cbr04131
]
Autophagy
Autophagosome formation proteins
ULK complex
CBG_16674 (Cbr-atg-13)
Atg1 complex
CBG_16674 (Cbr-atg-13)
Mitochondrial biogenesis [BR:
cbr03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
CBG_16674 (Cbr-atg-13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
8583961
NCBI-ProteinID:
XP_045096032
WormBase:
CBG16674
LinkDB
All DBs
Position
III:8145671..8147286
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AA seq
451 aa
AA seq
DB search
MEADYLSYKKFLKFFSTRMVQTLIQARLGDEIESKCSPYSKNTLDWFNVRVDEVGEISAY
IKSNIKNYPPVSKLTLEFFLYTPSGQCLPVEAWTLTVTEGSEDSGRTELYHEMSTLLRSV
IVSARMTPMHRLYVKKQNQESFVIMFRVFENDVSSDMGKGKKTRKIGELTSKFGTISLDL
HYRTSMHFEEPEIAPIIPPENEEEMEDGEKTVVDETTLQTRPVSEAVPIQDMKKRKASGS
VESSGGSSTSRETAPRFILGQSTSSEDSRHSDIGNSMEEDHKPSLADLRNHSFPFVNLLQ
SAYNPANGTKKNSSSTSLSKDFDPNLLEADSPKPEDVPPPSVEKVAESFRAAKIDEVVLE
EDEEEELPIDSMELSEDSFVHFNQISEFGGAPSLGNELGDYLKQLKLAPDMSTPGDIDIC
NMDLKSELEKVIASSANFDHFLKHVNSFSDE
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atggaagctgattatttgagttacaaaaagtttctgaaattcttctcgactcgtatggta
caaacgttaattcaggcaagactcggagatgaaattgaatcaaaatgttctccatactcg
aagaatacattggattggttcaatgtgcgagtcgatgaagtcggagaaatcagtgcgtat
atcaaatcgaacatcaaaaactatccaccggtcagtaaattgactctggaattctttttg
tatactccaagtggacaatgtcttcctgtggaagcatggactttaacagtgacagaagga
tctgaggatagtggaagaacggaactttatcatgaaatgagcactcttcttcggtccgta
atagtctctgccagaatgacaccaatgcatcgattgtatgttaaaaaacagaatcaggaa
agctttgttatcatgttcagagtttttgaaaacgatgtttcatcagacatgggaaaagga
aaaaagacgagaaaaattggagagttgacttcgaagtttggaacaatcagtttggatctt
cattatcgaacttctatgcattttgaggaacctgaaattgctccaattataccaccagaa
aatgaggaagaaatggaagatggagaaaaaacggttgtggatgaaacaactctacaaacg
agacctgtttctgaagctgttccaattcaagatatgaaaaaaagaaaagccagtggaagt
gtggaatccagcggagggagctcaacttctcgagaaactgctcctcgtttcattcttgga
cagtcgacgtcgagtgaagattctcgtcactctgacattgggaattcgatggaagaagat
cataaaccatcacttgcagatcttcgcaatcattcattcccatttgtaaatcttctgcaa
tctgcctacaatccagcaaatggaactaaaaagaattcgtcttcaactagtctcagtaag
gatttcgatcctaatcttttggaagctgactctccaaaacctgaagatgtcccaccccca
agtgtggagaaagttgctgaaagtttccgtgccgctaaaatcgacgaagtggttttggag
gaggacgaagaagaagagttgccgattgattccatggagctcagcgaagattctttcgta
catttcaatcaaatatcggaattcggcggtgctccaagtcttggaaacgaactgggagac
tatttgaaacaattgaaacttgctcctgatatgtcaactccaggcgatattgacatttgc
aatatggatttgaaatcggagctcgagaaagtgattgcctcatccgccaactttgaccat
tttctgaagcatgtcaattcattttccgacgagtag
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