Caenorhabditis briggsae (nematode): CBG_16696
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Entry
CBG_16696 CDS
T01054
Symbol
Cbr-sox-2
Name
(RefSeq) Protein CBR-SOX-2
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
cbr
Caenorhabditis briggsae (nematode)
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cbr03000
]
CBG_16696 (Cbr-sox-2)
Transcription factors [BR:
cbr03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
CBG_16696 (Cbr-sox-2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
SOXp
Motif
Other DBs
NCBI-GeneID:
8587041
NCBI-ProteinID:
XP_002645043
WormBase:
CBG16696
UniProt:
A0AAE8ZVM7
A8XPM5
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All DBs
Position
X:complement(12986136..12987665)
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AA seq
286 aa
AA seq
DB search
MMMDPDLSKMQDYSSWTFGFQMPPTSSNNIHQQSMQDDISNGPDSPDSTGKDGKKNDDRV
KRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGTEWKMLSEQDKRPFIDEAKRLRAIH
MKEHPDYKYRPRRKTKSINKKNGAPIPFGNLETKAPTYPTISNNWNPTNQYIDQFRFAPY
YSSSGVMDHIPFSLANPVHAVPTDNSSPSQYQPSPLNTNFSTSSYLTTPKSESSPVGSDS
TVGTIDSTQFRSYYDHSKDPMMYPYSLDLTHAQNIQNALSQSHVSS
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgatgatggatccggatttaagtaaaatgcaggattattcgagctggacgttcggattc
cagatgccgcccacatcctctaataatatacaccagcagtcaatgcaggatgatatatca
aatggtccagacagtcccgattcgacggggaaggatgggaaaaaaaatgatgacagagta
aaaaggcctatgaacgccttcatggtttggagcagagggcagaggagaaaaatggctcag
gaaaatcccaaaatgcacaattctgaaatcagtaaacgtcttggcacagaatggaagatg
ctcagcgaacaagacaagaggccattcatcgatgaagcaaaacggctacgcgcgattcat
atgaaggagcacccagattacaaatacagaccaaggaggaaaaccaagtcgatcaacaag
aagaacggagctccaatcccattcggaaacttggaaaccaaggcaccgacgtacccaacg
atctccaacaactggaatccaacaaaccagtacattgatcaattccgatttgctccatac
tactcatcctcaggagtgatggatcatatcccattctccctggccaacccagtacatgcg
gtgccaactgacaactcgtcgccatctcaataccaaccatccccattgaacaccaacttc
tcgacgagcagctacttgacaacaccaaaatcggagagctctccagtcggaagcgattcc
accgttggaaccatcgactccacgcagttccgatcctactacgatcattctaaggatcca
atgatgtacccatacagtcttgacttgacgcatgctcaaaacattcaaaatgctctttcc
caatctcatgtctcttcatga
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