Caenorhabditis briggsae (nematode): CBG_16697
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Entry
CBG_16697 CDS
T01054
Symbol
Cbr-coh-1
Name
(RefSeq) Protein CBR-COH-1
KO
K06670
cohesin complex subunit SCC1
Organism
cbr
Caenorhabditis briggsae (nematode)
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cbr03036
]
CBG_16697 (Cbr-coh-1)
Chromosome and associated proteins [BR:
cbr03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
CBG_16697 (Cbr-coh-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rad21_Rec8_N
Rad21_Rec8
SMC_ScpA
Motif
Other DBs
NCBI-GeneID:
8587042
NCBI-ProteinID:
XP_045096041
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Position
X:complement(12993462..13001355)
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AA seq
612 aa
AA seq
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MFYADFVLSKKGPLSKIWLAAHWEKKLSKAQIVETDVNEAVNEIMQPQQKLALRTTGHLL
LGICRVFSRQTKYLLADCNEAFLKIKLVFTKGALDQPNPTFPTFTIQDIYGEFGDNVLPE
FDDDELNHAPICQSRIDDITMKEDIPLKPSYDYTAILEDDDFGEIAAGVAPEDFTRMLED
VNKEFDAQEEVNSKGALFGRYRESTPALGEAHAPGNMIFGEDDIGGSYDDDRNEDDHNFQ
STSDYQHDNHMPIEEMDYGDDQYMRSEPPLGEEDNYRDETPLRSETPARSETPRVQSPTP
SVAPSTSQVLEQDTVESFYEKHAQKRAQAKEQTMKKRKLDDVRMITGEEMKANMADYREL
LVHLDLTPPTRKLMWAKRKSHADFLMHFPAMIGFTRCKQYIRAYQENLTVTKLPDNDQKV
EAIKNALQLWEIGEEDLQQQQQEMEMQVQDDPIYNDDFDDVAPIDYDNFDMCDIPQAFEP
QQDISDDESIPQRNPLSPFTCTTDDEDGSPSEKKRKFADDKDDMDESGIDEDNRWSKRTQ
LLLTTIAGKLDQNNGQIELDEMLKKGTSRKTAAAKFYSILCLKKNQCIDIEQKESYGDIV
IKAGPNIDVSLI
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgttttatgcggacttcgttctttcgaagaaagggcctctttccaaaatttggttagct
gctcattgggagaaaaagctgtccaaagctcaaatcgtcgaaaccgatgtcaatgaggcc
gtaaacgagattatgcagccacaacaaaaactggctctccggaccacaggacatttgctg
ttgggaatttgccgtgtcttctcgagacagaccaagtacttgctggcagactgcaatgaa
gctttcctcaagatcaagcttgtattcacaaagggagctttggatcaaccaaatccgact
ttcccgacgttcaccatccaagacatctacggagagttcggcgacaacgtactgccagag
tttgacgacgatgagctcaatcatgctccgatctgccagagccgcatcgacgacatcacc
atgaaggaggacattccgctcaagccgagctacgactacactgcaattcttgaggatgat
gactttggagagatcgctgctggagttgccccagaagacttcacccgtatgctggaagac
gtcaacaaggaattcgacgctcaggaggaggtgaacagcaaaggagctctcttcgggcgc
tatcgcgagtcaactccagctcttggtgaagctcatgctccaggaaacatgatctttgga
gaagacgacatcggtggttcctacgatgatgacagaaatgaggatgatcacaacttccaa
agcacctctgattatcaacatgacaatcatatgccgattgaggaaatggactatggggat
gaccaatacatgcgttcagagcctccactcggagaagaagataattatcgtgacgagact
ccattgcgttcggagactccggctcgttcggaaactccacgtgttcagagcccaactcca
tctgtcgcgccatctaccagccaggttttggagcaggacaccgttgaatcgttctacgag
aagcatgcacagaaaagagcccaagccaaggagcagaccatgaagaagcgcaaacttgat
gatgtcagaatgattactggagaggagatgaaagctaacatggccgattatagagagctt
ctcgtccatctcgatctgactccaccaactcgcaagctcatgtgggctaaacgcaagagt
cacgccgatttccttatgcactttccagccatgatcggattcaccagatgcaagcagtat
atcagagcctaccaggaaaatctcaccgtcaccaagcttccagacaacgaccagaaggtt
gaggctatcaaaaatgcattgcagctctgggagataggagaggaggaccttcaacagcaa
cagcaggagatggaaatgcaggttcaggatgatccaatctacaacgacgactttgatgat
gttgctccaatcgactatgacaactttgacatgtgtgacattccacaggcgtttgagcca
cagcaagatatttctgatgatgagtcgatcccacagagaaacccattgtcgccattcact
tgtaccactgatgatgaggatggatcgccaagcgagaaaaagaggaaattcgcggacgac
aaagacgatatggatgagagtggtattgatgaggataaccgctggtcaaagagaactcaa
ttgctgttgaccaccatcgctggaaagttggaccagaataatggacagatcgagctcgat
gagatgttaaagaagggaaccagccggaagactgcagctgccaaattctactcgatcctc
tgccttaaaaagaaccaatgcatcgacattgaacagaaagaatcctacggagatatcgtt
atcaaggccggaccaaatatcgatgtcagcttgatctaa
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