Caenorhabditis briggsae (nematode): CBG_16785
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Entry
CBG_16785 CDS
T01054
Symbol
Cbr-deg-1
Name
(RefSeq) Protein CBR-DEG-1
KO
K03440
acid-sensing ion channel, other
Organism
cbr
Caenorhabditis briggsae (nematode)
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cbr04040
]
CBG_16785 (Cbr-deg-1)
Ion channels [BR:
cbr04040
]
Ligand-gated channels
Acid-sensing ion channel (ASIC)
CBG_16785 (Cbr-deg-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ASC
Motif
Other DBs
NCBI-GeneID:
8587098
NCBI-ProteinID:
XP_045096059
WormBase:
CBG16785
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Position
X:13434865..13440299
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AA seq
787 aa
AA seq
DB search
MSSQHSKTKKTPGREDYIYSHDIPKNEKNGGEKFHGSPTKSNNFNQSKDDETMKAKMMDF
CDKTTAHGAKRVLIARNSFSKLMWGLIIFSFLLMFAYQASKLILKFNAHEKITDISLKFD
DVEFPAITFCNLNPYKKSLVMMVPSIRDTMDVYDNAKTHSKTEGDKKKPKISRKQHSDAS
QQMVRKLFAEEIEEGMAELKKSNLTLQMSNQAARNLTARRRSQRSVRKFQKKVENRRYEA
IEAHCKCVGNIGMECIRFESPPRDPGSKCICTYDRDMEVAWPCFNISVWYDHECPLCHDD
GYCELSLPNGVTSSDKWPCMCRNRGDTTSRDDTPYCIGKAGTGKIEIRKLWLENNMTTTT
TTTTTTPPPTTTTTTTTTTPPPTTEPRPNQRAIVSNPETIKAMGFQGMTDGVAMLTRAKE
NLMFTMAALSDKQRIALSQSKHEFIEMCSFNGKECDIDEDFRLHVDPEFGNCFTFNYDVD
NNYTSSRAGPMYGIRVLLFVNTSDYMSTSESSGVRLAIHPPTEYPFPDTFGYSAPVGFAS
SFGIKKKVMQRLPAPYGECVETKKVTDGNYIYSGYDYHPEGCHRSCFQNGLIDDCSCGDP
RFPVPEGYKHCSAFNATARACLERNIGSVGDFHHITEKMDKCVCKQSCEEIIHEVTFSCS
KWPSGATDLGDCEGMTENECEQYYRLNAAMIEVFYEQLNYELLQESEAYGLVNLIADFGG
HLGLWLGFSVITVMEVCVLLVDMISLFFKSRHEEKLLRESTRRKDIPEDKRQITIGTAKK
NDALVSI
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagtcaacacagtaaaacgaaaaagacgccgggacgcgaagattacatttatagt
catgacatcccgaaaaacgaaaaaaatggtggcgagaagttccacggctctcccaccaaa
tccaacaatttcaatcaaagcaaagacgatgaaaccatgaaggcgaaaatgatggatttc
tgcgacaaaacgacggctcacggagcaaaacgggtgttaatagcgagaaacagtttttcg
aaacttatgtggggcttgatcattttctcattcttactcatgtttgcatatcaagccagc
aaactgattctcaaattcaatgctcatgagaaaatcacggatatttcgctgaaattcgat
gatgtggagtttccagccatcacattttgcaatcttaatccttacaagaaaagtcttgtt
atgatggttccttcaatcagagacacgatggatgtgtacgataacgcaaaaacgcatagc
aaaacagaaggagacaagaaaaaaccgaaaatttcacgtaaacaacactccgatgcaagt
cagcagatggtccgcaagctgtttgccgaagaaatcgaagaagggatggcggagttgaaa
aagtcaaatttgacacttcagatgtcaaatcaggcagcgagaaatttgactgcaagacgg
agatcccagcgatcggtgaggaaatttcagaaaaaagtggagaatagaagatacgaggca
attgaagcacattgtaaatgtgtcggaaacattggaatggaatgtatccgttttgaatca
ccaccaagagatccgggatccaagtgtatctgtacctacgatagagatatggaagtggcc
tggccttgttttaacatcagtgtatggtacgaccacgaatgccctctctgtcacgatgac
ggttactgtgagctatctcttccgaacggagtcacgtcttctgacaaatggccttgcatg
tgcagaaaccgcggtgatactacgagtcgggacgacactccttactgtatcggaaaagct
ggtacaggaaaaatagaaattaggaagctctggctggaaaacaatatgactactaccaca
actacaactacaacaacacctccaccgactaccactacaaccacaacgactacgaccccg
cctcctacaactgagccacgaccgaatcaacgagcaattgtcagcaacccagaaaccatc
aaggctatgggttttcagggaatgactgatggagttgctatgctgaccagagcaaaagaa
aatttaatgttcaccatggctgcgttgtcagataaacaacgaattgcattgagtcagtct
aaacacgaattcattgaaatgtgctcctttaacggaaaagaatgcgatattgatgaagat
ttccgccttcatgttgatccagaattcggaaactgtttcactttcaactacgatgttgac
aataactacactagtagccgtgcaggtccaatgtacggtatccgtgttctccttttcgtg
aacacctctgactacatgtcgacttctgagtcatctggagttcgtcttgccattcatcca
ccaactgagtatccgttcccggatacgtttggttattctgcgccagttggttttgcgagc
agttttggaatcaaaaagaaggtcatgcaaagattaccagcaccatatggggaatgtgtt
gagactaaaaaagtgacagatgggaactacatttacagtgggtatgattatcatccagag
ggttgtcacagaagttgtttccaaaatggattaattgatgattgctcatgtggtgatcca
agattcccggttccagaaggatataaacattgctcggctttcaatgcaactgcccgtgcc
tgtttggagagaaacatcggatcagtcggagatttccatcatatcaccgagaaaatggac
aaatgtgtttgcaaacaatcatgtgaagaaatcatccacgaagttacattttcctgctcc
aaatggccatcaggtgctactgatcttggcgattgcgagggaatgactgaaaacgaatgt
gaacagtactacagattgaatgcggccatgattgaggtattctacgaacaactgaactac
gaattgttgcaagaatcggaagcctacggtttggtcaatcttattgccgattttggaggg
catttgggtctttggctaggattctctgttatcaccgtcatggaagtatgcgtcttgttg
gtggatatgatatcgttgttcttcaaaagccgacatgaagaaaaattgctgagagaaagc
acgagaagaaaagatattccagaagacaagcggcagataacaattggaactgcgaaaaaa
aatgatgcccttgtatccatataa
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