Caenorhabditis briggsae (nematode): CBG_16828
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Entry
CBG_16828 CDS
T01054
Name
(RefSeq) Protein CBG16828
KO
K03231
elongation factor 1-alpha
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CBG_16828
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbr03019
]
CBG_16828
03016 Transfer RNA biogenesis [BR:
cbr03016
]
CBG_16828
03012 Translation factors [BR:
cbr03012
]
CBG_16828
04131 Membrane trafficking [BR:
cbr04131
]
CBG_16828
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cbr04147
]
CBG_16828
Messenger RNA biogenesis [BR:
cbr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
CBG_16828
Transfer RNA biogenesis [BR:
cbr03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
CBG_16828
Translation factors [BR:
cbr03012
]
Eukaryotic type
Elongation factors
CBG_16828
Membrane trafficking [BR:
cbr04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
CBG_16828
Exosome [BR:
cbr04147
]
Exosomal proteins
Proteins found in most exosomes
CBG_16828
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
WH_Rok
DUF34_NIF3
Semialdhyde_dhC
DUF5036
Motif
Other DBs
NCBI-GeneID:
8587132
NCBI-ProteinID:
XP_002645134
WormBase:
CBG16828
UniProt:
A0AAE9FJ33
G2J6X0
LinkDB
All DBs
Position
X:13558307..13559856
Genome browser
AA seq
463 aa
AA seq
DB search
MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGT
GEFEAGISKNGQTREHALLAQTLGVKQLIVACNKMDSTEPPFSEARFTEITNEVSGFIKK
IGYNPKAVAFVPISGFNGDNMLEASANMPWFKGWAVERKEGNASGKTLLEALDAIIPPQR
PTDRPLRLPLQDVYKIGGIGTVPVGRVETGIIKPGMVVTFAPQNVTTEVKSVEMHHESLP
EAVPGDNVGFNVKNVSVKDIRRGSVCSDSKQDPAKEARTFHAQVIIMNHPGQIAAGYTPV
LDCHTAHIACKFNELKEKVDRRTGKKVEDFPKFLKSGDAGIVELIPTKPLCVESFTDYAP
LGRFAVRDMRQTVAVGVIKSVEKSDGSSGKVTKSAQKAAPKKK
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaggaaaaggttcatattaacatcgtcgtcatcggacacgtcgactccggaaag
tccaccaccaccggacacttgatctacaagtgcggaggaatcgacaagagaactatcgag
aagttcgagaaggaagcccaggaaatgggaaagggatccttcaagtacgcctgggttctt
gacaagctgaaggccgagcgtgaacgtggtatcaccatcgatattgctctctggaagttc
gagactgccaagtactacatcaccatcattgatgccccaggacatcgtgatttcatcaag
aacatgatcaccggaacctcccaggctgattgcgccgtcttggtcgtcgcttgcggaacc
ggagagttcgaggccggaatctccaagaacggacaaacccgtgagcacgctctcctcgcc
caaacccttggagtcaagcagctcatcgttgcctgcaacaagatggactccaccgagcca
ccattctctgaggcccgtttcactgagatcaccaacgaggtctccggattcatcaagaag
atcggatacaatccaaaggccgtcgccttcgtcccaatctctggattcaacggagacaac
atgctcgaggcctccgccaacatgccatggttcaagggatgggccgttgagcgcaaggaa
ggaaatgcttccggaaagaccctcctcgaggctcttgacgccatcattccaccacaacgc
ccaactgaccgaccactccgtctcccactccaggacgtgtacaagatcggaggaatcgga
actgtcccagtcggacgtgtcgagaccggaatcatcaagccaggaatggttgtcaccttc
gctccacagaacgtgaccactgaagtcaagtccgtcgagatgcaccacgagtctctccca
gaggccgttccaggagacaacgttggattcaacgtcaagaacgtctccgtcaaggacatc
cgtcgtggatccgtctgctctgactccaagcaagacccagccaaggaggctcgcaccttc
cacgctcaggtcatcatcatgaaccacccaggacaaatcgccgctggatacactccagtt
ctcgattgccacaccgctcacattgcttgcaagttcaacgagcttaaggagaaggtcgat
cgccgtaccggtaagaaggtcgaggacttccctaagttcctcaagtccggagatgccgga
atcgttgagctcatcccaaccaagccactctgcgtcgagtccttcaccgactacgctcca
ctcggacgtttcgccgttcgtgacatgcgtcaaaccgtcgctgtcggagtcatcaagtcc
gtcgagaagtccgatggatcatctggaaaggtcaccaagtccgcccagaaggccgctcca
aagaagaagtaa
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