Caenorhabditis briggsae (nematode): CBG_17297
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Entry
CBG_17297 CDS
T01054
Name
(RefSeq) Protein CBG17297
KO
K20306
trafficking protein particle complex subunit 9
Organism
cbr
Caenorhabditis briggsae (nematode)
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cbr04131
]
CBG_17297
Membrane trafficking [BR:
cbr04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
CBG_17297
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC9-Trs120
DUF4844
Motif
Other DBs
NCBI-GeneID:
8585934
NCBI-ProteinID:
XP_045096158
WormBase:
CBG17297
LinkDB
All DBs
Position
X:complement(4897733..4904426)
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AA seq
1259 aa
AA seq
DB search
MKSSTSDFLTDVQTVNIVIKQIGPNKSLPAFKRIVERCSRQRVIQVSDNPRRLFHCSFTQ
TSSYTEFSELQQHRRVFAVIGVAFTNGHGEPDKSIRASRESTDSEASESEQISSAYNKLK
ADYPNIICGRCILIGGKDEDFNQVERHERLCFPSLEEAGQLESAVRELMRAIYIVIEMKR
VDVSFEKKQEIPCPTLPDESRWQVGVETKSTKSYKKKCLGRYRKQHADYCLLTGLPQLAL
EAYEGAIESLKSVCFSSFFQIFVISYMYLGCGRTFSFFSSAAYDGWASTVCILHAEQMGE
INCGAFHRVASMHAMLTIPSIEIKTQNGESLSVSNDSVLSSPQGHKRHHSDEHIRVNSSM
SGGSMERNESFGNESGIVSNGSSPSIREEPTKIKASKGLNPLTNFLSDRREKPTKERVME
NFKNAIDEFSKFTMAGWLEYETVMRAIMYLILEREYIKLEQFHRDYTGKYLDDANTFMDH
RMKAQICLNSAAMYKEIGFLRKQAFYARLSVLFELHVTEGRVRHASDYKTVYPVLFKTLE
GYGVDLNEPHDMKNKKLGPVKLQIKSLHEIFTAANRAGHRDAAIRHLCFLLQVYYPHLDS
SMTTRLFDDLDNLVKATPTVHQLSQTIVVDDGKIIIPGLQLTRFPLIQTPTVLALQPNLV
PTIVPDKSQASIFIYTPFGKKVDNSLLWVTDCPGEVEVTVRNCRETELIVRDLCLIVEGV
NFDPVQARLILPPEDEENNSGSTIRLLGVPKEPGDLFITGYSCNIFGLHNECRFVTSNGN
SHKPNKIRVKVLPKLARVYLECSLPRAPIDEDNEEPSAEAVVYSGQKFDHTITVVNSSDI
PVRYCGVKIWQPIVQGGPPLIRLDDSETHAPEFDGFEISDDLSSFVLEPNGSRELKFHIF
GIDPTSTADDLSDEEKVLESVIPLANTSANSETESSDMDLIPFTGRLLTAEFIVRYHSDI
TSDEGHSFERKCKLPIAVSIIPAVTVSAWHVLPGDSPFSRLVTFLQTSGKKLFFRYIVVD
VTNSTEHDAELVYSNARRMYVLPKETCRVPILSPCCSDVTGGAFHQAKQRGSHMMQKMET
ERLRLILENHVSKHLDIRWAIPALNIEGQVPVGSLLSSVSLLKQLVLPAISLDFYVNGKQ
YVSEDDVAVGIGQFVTVEVSIISSLAAEYNGLLSLECEQEISHSLGSNDTGNFMLVTGAK
KIPFAVDKENKQSASFSVTFIVEGSFRVRPLITPMPGQHALLPEDMFATPVAFSVTTKF
NT seq
3780 nt
NT seq
+upstream
nt +downstream
nt
atgaaatctagtacatcagattttttgaccgatgtacagactgtaaatatcgtcatcaaa
cagatagggccaaataaatcacttccggcgttcaagcgtattgtggagagatgctcgaga
caacgcgtcattcaagtttcggataatccgcgtcgactattccactgctcatttacacaa
acctcgtcatacacggaattcagcgagttgcagcaacatcgtcgcgtgtttgctgtcatt
ggtgtcgcattcacaaatggtcatggagagccggacaaatcgattcgagcctctcgcgag
tccacagattctgaagcctccgaatcggagcagatctcatcggcatataacaaattgaag
gccgactacccgaatattatctgtggacggtgtattctcatcggaggcaaagacgaagac
ttcaatcaagtcgagagacatgaacgcctttgtttcccaagtctggaagaggctggccaa
ctggaaagtgccgttcgtgaattgatgagagctatttacattgtcatcgagatgaaacga
gttgatgtatcgtttgagaagaagcaagaaattccatgtccaacacttccggatgaatct
cgctggcaagttggtgtggagacaaagtcaacgaagagttacaaaaagaagtgtcttggt
agatatcgcaaacaacacgcggactactgtcttctcaccggcctacctcaactggcgctg
gaagcttatgaaggagcaatcgagagtctgaaatccgtttgtttttcctctttctttcag
atttttgtaatctcatatatgtatcttgggtgtggtcgaacgttttcctttttttcttca
gcggcatatgatggatgggcaagtacggtctgcatccttcacgcggaacagatgggcgag
attaactgcggcgcgtttcaccgcgttgccagcatgcacgcgatgctaacaattccatcg
atcgaaatcaagacgcaaaacggcgaaagtttatccgtatcgaatgacagcgttctcagc
tcaccacagggacacaaacgacaccattcagatgaacacattcgggtaaactcgtcaatg
tccggaggaagtatggagaggaatgagtcgtttggaaatgagagtggaattgttagcaat
ggatcatcgccgtcgattcgagaggaaccaaccaagattaaagcgtcaaaagggctgaat
ccgctcaccaactttcttagtgataggcgggagaagccaacaaaagagcgagtcatggaa
aatttcaaaaatgccattgacgagttctccaagttcacaatggccggatggttagagtat
gagactgtgatgcgtgcaattatgtatttgattctggagcgggagtatattaaactcgag
caattccatcgtgactacactggaaaatatctcgacgatgcgaacacttttatggatcat
cgtatgaaagcacaaatctgtctcaactcggcagccatgtacaaagaaattgggtttctt
cggaaacaagcgttttatgcgagattgagtgtcctttttgagcttcatgtgacagaggga
agggttcgacacgcgagtgattacaaaaccgtatatccagtccttttcaaaactctcgaa
gggtacggtgttgatctcaacgagccacatgacatgaagaacaagaagttgggtccagtg
aagcttcaaattaagtctcttcatgaaattttcacagcagcaaatcgtgctggccatcgt
gatgccgcgattcgacatctttgttttttgcttcaggtctactacccccatctcgacagt
tccatgacgactcgactttttgatgatctagacaacttggtaaaggccacacccacggta
caccaactcagccagactattgtggttgatgatgggaaaatcatcatcccaggacttcaa
ctgacaagattcccacttattcaaacacccacagtgcttgctctccaaccgaatttggtg
ccaacaatcgttcccgacaagagtcaagcgtcgattttcatctacacaccgtttggcaaa
aaggtcgataactcacttttgtgggtgaccgattgtcctggcgaggttgaggtgactgtg
agaaactgtcgtgagaccgaattgatcgttcgtgatctttgtctgattgtcgaaggagtg
aattttgatccggttcaagctcgcctcattttgccacctgaagacgaggagaacaattcg
ggatcaacgattcgacttttgggagtgccgaaagaacccggcgacctattcatcactggc
tactcttgcaacatctttggacttcacaacgagtgccgttttgttaccagcaacgggaat
agtcacaaacctaacaagattcgtgtcaaggtcctacccaaacttgccagagtctatttg
gaatgctcccttccacgtgctccaatcgacgaggacaacgaggagccttctgcagaagca
gttgtctattctggtcaaaaatttgatcacactatcacagttgtgaacagcagtgacatt
ccggttcgctattgcggtgtcaagatttggcagccgattgttcaaggaggtccacctctc
attcgacttgacgattcggagacgcatgccccagagtttgatggatttgaaatttctgat
gatctttcgagctttgtcctggaacccaatggatctagagagctcaaattccacatcttt
ggaatcgatccaacatctactgctgatgatttgagtgatgaggagaaagttcttgaaagt
gttatccccttggctaatacctcagcaaactctgaaacagaatctagtgacatggacctc
atcccattcactggacgtcttctcaccgcggaattcatcgtgagataccactcggacatt
acgtcagacgagggacactcttttgagcgaaagtgcaaacttcctatcgcagtttcaatc
atcccggcggtcaccgtctccgcatggcacgtactcccgggagatagcccattctcacgg
ttggtgacttttttacaaacatcaggaaaaaaacttttttttaggtacatcgtggttgat
gtgaccaacagcactgaacatgacgcagaactggtgtacagcaatgcaaggcggatgtat
gtgcttccgaaagagacgtgtcgagttccgattctctcaccatgctgttcggatgtcaca
ggaggcgcttttcatcaagccaaacaacgcggaagtcatatgatgcagaaaatggaaact
gaacggttgagattgattctggagaatcatgtttcgaagcatttggatattcgttgggcg
attccagcgttgaatatcgaaggtcaagtccccgtcggatctcttctctcatcagtgtct
cttctgaaacaactcgttctccctgccatcagtcttgacttctacgtcaatggcaaacag
tacgttagtgaagatgacgtggcagttggcattggacagtttgtcacggttgaagtttcc
atcatttcatctctagcagcggagtacaatggtttgctgtcgttggagtgtgaacaagaa
atctctcattcgctcgggtcgaatgataccggcaattttatgctagtcaccggtgctaag
aagattccgtttgctgttgataaagaaaacaagcaatcggcaagcttcagtgtcacgttc
atcgtcgaaggaagtttccgcgttcgcccccttatcacgccgatgccaggacaacatgct
ctccttccagaagacatgttcgcgacgccagttgcattcagtgtcaccaccaaattctaa
DBGET
integrated database retrieval system
