Caenorhabditis briggsae (nematode): CBG_17299
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Entry
CBG_17299 CDS
T01054
Name
(RefSeq) Protein CBG17299
KO
K20306
trafficking protein particle complex subunit 9
Organism
cbr
Caenorhabditis briggsae (nematode)
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cbr04131
]
CBG_17299
Membrane trafficking [BR:
cbr04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
CBG_17299
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC9-Trs120
DUF4844
Motif
Other DBs
NCBI-GeneID:
8585936
NCBI-ProteinID:
XP_045096159
WormBase:
CBG17299
UniProt:
A8XQS6
LinkDB
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Position
X:complement(4905854..4911945)
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AA seq
1331 aa
AA seq
DB search
MKSSTSDFLTDVQTVNIVIKQIGPNKSLPAFKRIVERCSRQRVIQVSDNPRRLFHCSFTQ
TSSYTEFSELQQHRRVFAVIGVAFTNGHGEPDKSIRASRESTDSEASESEQISSAYNKLK
ADYPNIICGRCILIGGKDEDFNQVERHERLCFPSLEEAGQLESAVRELMRAIYIVIEMKR
VDVSFEKKQEIPCPTLPDESRWQVGVETKSTKSYKKKCLGRYRKQHADYCLLTGLPQLAL
EAYEGAIESLKSAQDHLWLAGIPVAREKSKQMICSSPQGHKRHHSDEHIRVNSSMSGGSM
ERNESFGNESGIVSNGSSPSIREEPTKIKASKGLNPLTNFLSDRREKPTKERVMENFKNA
IDEFSKFTMAGWLEYETVMRAIMYLILEREYIKLEQFHRDYTGKYLDDANTFMDHRMKAQ
ICLNSAAMYKEIGFLRKQAFYARLSVLFELHVTEGRVRHASDYKTVYPVLFKTLEGYGVD
LNEPHDMKNKKLGPVKLQIKSLHEIFTAANRAGHRDAAIRHLCFLLQVYYPHLDSSMTTR
LFDDLDNLVKATPTVHQLSQTIVVDDGKIIIPGLQLTRFPLIQTPTVLALQPNLVPTIVP
DKSQASIFIYTPFGKKVDNSLLWVTDCPGEVEVTVRNCRETELIVRDLCLIVEGVNFDPV
QARLILPPEDEENNSGSTIRLLGVPKEPGDLFITGYSCNIFGLHNECRFVTSNGNSHKPN
KIRVKVLPKLARVYLECSLPRAPIDEDNEEPSAEAVVYSGQKFDHTITVVNSSDIPVRYC
GVKIWQPIVQGGPPLIRLDDSETHAPEFDGFEISDDLSSFVLEPNGSRELKFHIFGIDPT
STADDLSDEEKVLESVIPLANTSANSETESSDMDLIPFTGRLLTAEFIVRYHSDITSDEG
HSFERKCKLPIAVSIIPAVTVSAWHVLPGDSPFSRYIVVDVTNSTEHDAELVYSNARRMY
VLPKETCRVPILSPCCSDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVWSSAGTIPI
TLKILEGVKQS
NT seq
3996 nt
NT seq
+upstream
nt +downstream
nt
atgaaatctagtacatcagattttttgaccgatgtacagactgtaaatatcgtcatcaaa
cagatagggccaaataaatcacttccggcgttcaagcgtattgtggagagatgctcgaga
caacgcgtcattcaagtttcggataatccgcgtcgactattccactgctcatttacacaa
acctcgtcatacacggaattcagcgagttgcagcaacatcgtcgcgtgtttgctgtcatt
ggtgtcgcattcacaaatggtcatggagagccggacaaatcgattcgagcctctcgcgag
tccacagattctgaagcctccgaatcggagcagatctcatcggcatataacaaattgaag
gccgactacccgaatattatctgtggacggtgtattctcatcggaggcaaagacgaagac
ttcaatcaagtcgagagacatgaacgcctttgtttcccaagtctggaagaggctggccaa
ctggaaagtgccgttcgtgaattgatgagagctatttacattgtcatcgagatgaaacga
gttgatgtatcgtttgagaagaagcaagaaattccatgtccaacacttccggatgaatct
cgctggcaagttggtgtggagacaaagtcaacgaagagttacaaaaagaagtgtcttggt
agatatcgcaaacaacacgcggactactgtcttctcaccggcctacctcaactggcgctg
gaagcttatgaaggagcaatcgagagtctgaaatccgctcaggatcatttgtggcttgca
ggtatcccagtggctagggaaaaatcaaaacaaatgatttgcagctcaccacagggacac
aaacgacaccattcagatgaacacattcgggtaaactcgtcaatgtccggaggaagtatg
gagaggaatgagtcgtttggaaatgagagtggaattgttagcaatggatcatcgccgtcg
attcgagaggaaccaaccaagattaaagcgtcaaaagggctgaatccgctcaccaacttt
cttagtgataggcgggagaagccaacaaaagagcgagtcatggaaaatttcaaaaatgcc
attgacgagttctccaagttcacaatggccggatggttagagtatgagactgtgatgcgt
gcaattatgtatttgattctggagcgggagtatattaaactcgagcaattccatcgtgac
tacactggaaaatatctcgacgatgcgaacacttttatggatcatcgtatgaaagcacaa
atctgtctcaactcggcagccatgtacaaagaaattgggtttcttcggaaacaagcgttt
tatgcgagattgagtgtcctttttgagcttcatgtgacagagggaagggttcgacacgcg
agtgattacaaaaccgtatatccagtccttttcaaaactctcgaagggtacggtgttgat
ctcaacgagccacatgacatgaagaacaagaagttgggtccagtgaagcttcaaattaag
tctcttcatgaaattttcacagcagcaaatcgtgctggccatcgtgatgccgcgattcga
catctttgttttttgcttcaggtctactacccccatctcgacagttccatgacgactcga
ctttttgatgatctagacaacttggtaaaggccacacccacggtacaccaactcagccag
actattgtggttgatgatgggaaaatcatcatcccaggacttcaactgacaagattccca
cttattcaaacacccacagtgcttgctctccaaccgaatttggtgccaacaatcgttccc
gacaagagtcaagcgtcgattttcatctacacaccgtttggcaaaaaggtcgataactca
cttttgtgggtgaccgattgtcctggcgaggttgaggtgactgtgagaaactgtcgtgag
accgaattgatcgttcgtgatctttgtctgattgtcgaaggagtgaattttgatccggtt
caagctcgcctcattttgccacctgaagacgaggagaacaattcgggatcaacgattcga
cttttgggagtgccgaaagaacccggcgacctattcatcactggctactcttgcaacatc
tttggacttcacaacgagtgccgttttgttaccagcaacgggaatagtcacaaacctaac
aagattcgtgtcaaggtcctacccaaacttgccagagtctatttggaatgctcccttcca
cgtgctccaatcgacgaggacaacgaggagccttctgcagaagcagttgtctattctggt
caaaaatttgatcacactatcacagttgtgaacagcagtgacattccggttcgctattgc
ggtgtcaagatttggcagccgattgttcaaggaggtccacctctcattcgacttgacgat
tcggagacgcatgccccagagtttgatggatttgaaatttctgatgatctttcgagcttt
gtcctggaacccaatggatctagagagctcaaattccacatctttggaatcgatccaaca
tctactgctgatgatttgagtgatgaggagaaagttcttgaaagtgttatccccttggct
aatacctcagcaaactctgaaacagaatctagtgacatggacctcatcccattcactgga
cgtcttctcaccgcggaattcatcgtgagataccactcggacattacgtcagacgaggga
cactcttttgagcgaaagtgcaaacttcctatcgcagtttcaatcatcccggcggtcacc
gtctccgcatggcacgtactcccgggagatagcccattctcacggtacatcgtggttgat
gtgaccaacagcactgaacatgacgcagaactggtgtacagcaatgcaaggcggatgtat
gtgcttccgaaagagacgtgtcgagttccgattctctcaccatgctgttcggatgtnnnn
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nnnnnnnnnnnnnnnnnnnnnnnnnnnngagtttggagctcggctggcacgattccgatc
actttgaaaattctggagggtgtaaaacagagctag
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