Caenorhabditis briggsae (nematode): CBG_17616
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Entry
CBG_17616 CDS
T01054
Symbol
Cbr-hars-1
Name
(RefSeq) Protein CBR-HARS-1
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CBG_17616 (Cbr-hars-1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cbr01007
]
CBG_17616 (Cbr-hars-1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cbr03016
]
CBG_17616 (Cbr-hars-1)
Enzymes [BR:
cbr01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
CBG_17616 (Cbr-hars-1)
Amino acid related enzymes [BR:
cbr01007
]
Aminoacyl-tRNA synthetase
Class II (A)
CBG_17616 (Cbr-hars-1)
Transfer RNA biogenesis [BR:
cbr03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
CBG_17616 (Cbr-hars-1)
Prokaryotic type
CBG_17616 (Cbr-hars-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_His
HGTP_anticodon
HGTP_anticodon2
WHEP-TRS
tRNA-synt_2d
Motif
Other DBs
NCBI-GeneID:
8576278
NCBI-ProteinID:
XP_045100824
WormBase:
CBG17616
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All DBs
Position
IV:11922356..11924468
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AA seq
556 aa
AA seq
DB search
MPAELNAEQRKALEDEIKVMGDEIRKLKTEKADPAVMFRTLASKLAFSIRLSEETVVKPR
IAYAQRSGRRIKERVNKMLEKKKELGGGEEKPGKFVLKTGKGTRDYGPAQSALRNSVLQN
VVETFNKYGAETIDTPVFELRDVLMGKYGEEGGKLVYDLQDQGGELLSLRYDLTVPFARY
LAMNKITNITRYQIAKVYRRDQPVMSRGRYREFYQCDFDIAGQYDLMLPEAECLGIVNEL
LTKLEIGEFFINLNHRLILEGMFAVSGISPKDFKTICSSVDKLDKTPWAEVEEEMIKEKF
LTKEQTSKLGELVRFRELNSNLNNLELLEKMSALPELGQNEKFKKGAEELKVLIGYLEVD
GVTTVRYEPSLARGLDYYTGAIYEAVAPKALEGTAAEKAEDTAGQPVGVGSVAAGGRYDG
LVNMFDSKLKVPCCGVSFGIERLFAIMEARQKSAVRTTQTEVYVASAQKNMVIERKKLLR
TLRAAGIKSEMPLKANPKLLTQFQYAEERRIPLVVLIGERELQEGIVKLRNVVSREEKDV
PLDSLVSTIRDNLAAL
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgccggctgaactaaacgctgaacagaggaaggctctcgaagatgagatcaaagtgatg
ggagatgagatccgcaaactgaagaccgagaaagccgatccggctgttatgttccgaaca
ttggcgagtaaactggcgttttctatccggttatcggaagagacagtagtgaaaccgcgg
attgcatacgctcaaagaagtggaagaaggatcaaggagcgggtcaacaagatgctcgaa
aagaagaaggagcttggtggtggcgaagagaagcctggaaaattcgttctgaaaaccgga
aaaggaactcgggactacggaccggctcaatcggctctccgtaactctgttcttcaaaat
gtggtcgaaacgttcaacaaatatggagcagaaactattgatactcctgtcttcgagctt
cgtgatgtgttaatgggaaagtatggagaagaaggaggaaaactcgtctatgatctccaa
gaccaaggaggagagcttctctcgcttcgttatgatctcactgtcccttttgctcgatac
ttggcaatgaacaaaatcactaatattacgagataccagatcgcaaaagtgtacagacga
gatcaacctgtgatgtctcgtggacggtatcgcgagttctatcaatgcgatttcgatatt
gctggacagtacgatttgatgcttccggaagctgaatgcctaggtattgtgaacgagctg
ctcaccaagctcgaaatcggagagttcttcatcaacctcaatcaccgattgatcctcgaa
ggaatgttcgctgtctctggaatttcgccaaaagatttcaagacaatttgctcgtcagta
gacaaactagacaaaactccatgggcggaggttgaggaagagatgattaaggagaaattc
ttaacgaaagagcaaacttcaaaactcggagagttggttagattcagagagctgaacagt
aatctcaacaacttggaattgctcgaaaagatgtcggctcttcctgaactcggacagaat
gagaagtttaagaagggagcagaagagttgaaggttctcattggataccttgaagttgat
ggcgtgacgacagtaagatatgaaccatcgctggcaagaggactggattattacaccgga
gctatctatgaagcggttgcaccaaaagcattggaaggaaccgctgccgaaaaagccgag
gataccgctggacagccggtcggtgtaggatcagtggctgctggaggacggtacgatgga
cttgtcaatatgttcgattcaaaactcaaagttccgtgctgtggagtttcgtttggaatt
gagcgcctttttgctatcatggaagctcgtcagaagtcagccgttcgaacaacccaaacg
gaagtttacgtggcttccgcacaaaagaacatggtcattgaacgaaagaagttgttaaga
actcttcgtgccgcaggcattaagagtgaaatgccattgaaggcgaatccaaagttgttg
acacaattccaatatgccgaggagcgacgtatcccattggtggtgcttattggagaacga
gaactccaagagggaatcgtcaagttgcgaaatgttgtgagcagagaagaaaaggacgtt
ccgctcgactcattggtctcaaccattagagataatctcgctgctctctag
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