Caenorhabditis briggsae (nematode): CBG_17675
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Entry
CBG_17675 CDS
T01054
Symbol
Cbr-rsp-6
Name
(RefSeq) Protein CBR-RSP-6
KO
K12896
serine/arginine-rich splicing factor 7
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CBG_17675 (Cbr-rsp-6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cbr03041
]
CBG_17675 (Cbr-rsp-6)
Spliceosome [BR:
cbr03041
]
Common components
Common spliceosomal components
SR proteins
CBG_17675 (Cbr-rsp-6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_5
KorB_C
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
8576327
NCBI-ProteinID:
XP_045096276
WormBase:
CBG17675
LinkDB
All DBs
Position
IV:11706108..11706750
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AA seq
173 aa
AA seq
DB search
MDAKVYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPPGFAFVEYDDVRDAEDAVRALD
GSRICGVRARVELSTGQRRGGGGRGGGYGGGYGGRGGGRDSSIRGPYFKILADSARPRPH
LPSQTSLSSTPLHLLSSRHLLLLFHTTLRPFLLPKQSPENCICRVSSAKLPPQ
NT seq
522 nt
NT seq
+upstream
nt +downstream
nt
atggacgccaaggtgtacgttggcggtcttcccagtgatgcaacatcacaagagctcgaa
gagattttcgaccgattcggaagaattcgcaaagtttgggtagctcgccgccctccaggt
ttcgcttttgtcgagtacgacgacgttcgtgatgctgaagatgccgtccgcgcacttgat
ggatcgagaatttgtggtgttcgtgctcgtgtagaactttccactggacaacgccgtggt
ggtggcggtcgcggtggtggttatggcggtggatatggtggccgaggaggaggtcgtgac
agttcaattcgtggaccatatttcaaaattttagcggactccgctcgtccgcgtccccat
ctgccatcccaaacttcactctcttccactcctctccatcttctgtcgtcacgacacctt
cttcttctcttccacaccactttgcgcccttttcttctcccaaaacaatcgccagagaat
tgtatctgtcgcgtttcatcagctaaacttccgccgcagtag
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