KEGG   Caenorhabditis briggsae (nematode): CBG_17887
Entry
CBG_17887         CDS       T01054                                 
Symbol
Cbr-ergo-1.2
Name
(RefSeq) Protein CBR-ERGO-1.2
  KO
K11593  eukaryotic translation initiation factor 2C
Organism
cbr  Caenorhabditis briggsae (nematode)
Pathway
cbr04361  Axon regeneration
Brite
KEGG Orthology (KO) [BR:cbr00001]
 09150 Organismal Systems
  09158 Development and regeneration
   04361 Axon regeneration
    CBG_17887 (Cbr-ergo-1.2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cbr03019]
    CBG_17887 (Cbr-ergo-1.2)
   03036 Chromosome and associated proteins [BR:cbr03036]
    CBG_17887 (Cbr-ergo-1.2)
Messenger RNA biogenesis [BR:cbr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     CBG_17887 (Cbr-ergo-1.2)
Chromosome and associated proteins [BR:cbr03036]
 Eukaryotic type
  Gene silencing
   RISC (RNA-induced silencing complex)
    CBG_17887 (Cbr-ergo-1.2)
   RNA interference (RNAi) pathway
    RITS (RNA-induced transcriptional silencing) complex
     CBG_17887 (Cbr-ergo-1.2)
   microRNA pathway
    RISC loading complex
     CBG_17887 (Cbr-ergo-1.2)
SSDB
Motif
Pfam: Piwi ArgoL2
Other DBs
NCBI-GeneID: 8589696
NCBI-ProteinID: XP_045096329
WormBase: CBG17887
LinkDB
Position
V:<5707659..>5713664
AA seq 1174 aa
MSNYNRGYDDNRRDGGGGDRRGGYDNQRGNDDYRDGGYQDNRGGNRDYRGNDRGGYENRD
GGYQDNRDGNRDYRGNDRGGYENRDGGYQDNRDGNRDYRGNDRGGYENRDGGYQDNRDGN
RDYRGNDRGGYDHRDGGYQGNRDNYRGGNDNRDGGYRGGNDNYRGNDNYRGNDDRRGYQD
RGNQGGYQDRGGYQDRGGRDHGDNLNQQMGRMGLGGGRGDGGNIYAQQRDGPRPQRSAAG
MANPGDLAGSADHPNMPVAKKDLAHNSQTFAKRPDTSAYDNPRCGTKIELLTNHSLVHLP
HEPIKLFEYNIDVFKGRKKLEKREEAGPMFREIASTSERKDLASFTEYVYNDVNLLWSMK
SLPRSEGPVSGKNGYIYYKFTRVVELGSEVRNQDSQLLSTLVDAIATARVRWPKRTGNQF
SVFKRSIFLLQNRVDDGAFGDAPIFVKLRNGVDARIGVSMGIKLNLRVGITACFDVSHTL
FTRPGYPLVRLFWELIHGDTLTDEEIVEGNWDADMKLARPTGQNIKLMSDVLKDMRIMFT
NKDGLKFDEKGNYEERDLKRLKEKKPTKGNTKKTLYPLEVCSLLIDPVRYTGLITEKLKG
NMIQYTTLKAEQRKLVLQNIIGQKAIGDCPPIVDNNDRYMTGHGITIDKEMLTVKACLLP
PPKVVYGNSEFLDSEHLGEWEAVTHDPVRTVLDDAIYVRSRVPGAPKLKKRILGCILKIG
SPMNSSVDFGIDDMCYHNLMKAIEAAGQPVCWANRDMGQAVIHASEEYLQGRDLPGVKLD
WMRNLNNENLDSYKQSEDEVIVPLVLMIFQVRFTTLNCERSEFQNDYNLFKWMADNEVGV
FTQGLLYKTFNSIGNTPASCRFTRLIVEKILGKIGTTHRRLERDGDHKSWKKLVNPAEPT
LFLGVDVSHPSARDLKGDDPVKRLSVATVVGNIDLDCTEYRASSKLQDVGEERIVRFQEE
IQKRIGEFVQFNGISPAHIVIYRDGLSEGDFQRTLYEEKTAVETACKQFGPGFKTTLTYI
VVTKRHHTRFFLKDEEQGLEQQGYNIRPGTLVEDTVTTNDYYDFFLTTQVGQVGLARPTH
YYVLLNDWDVPATFWPTVTHALTYLFCRTTSTVTLPAPVLYAHLAAKRAKETMDGALFAN
RGVGRVFDLSQFSELAQLTNCLQSNPSLDGMTFV
NT seq 3525 nt   +upstreamnt  +downstreamnt
atgagcaactacaacagaggatacgatgacaatcgtcgcgatggtggtggcggagatcgc
cgtggtggttatgataaccaaagaggcaatgacgactacagagacggaggctaccaggat
aatcgtggtggcaatcgtgactacagaggaaacgaccgtggcggatacgagaacagagat
ggtggctaccaggacaatcgtgacggcaatcgtgactacagaggaaacgaccgtggcgga
tacgagaacagagatggtggctaccaggacaatcgtgacggcaatcgtgactacagagga
aacgaccgtggcggatacgagaacagagatggtggctaccaggacaatcgtgacggcaat
cgtgactacagaggaaacgaccgtggcggctacgaccatagagatggaggctaccaagga
aaccgtgataactacagaggtggaaatgataacagagacggcggctaccgtggcggcaac
gacaactacagaggcaacgacaactacagaggcaacgacgatcgccgaggataccaagac
cgtggcaaccagggaggctaccaagaccgtggaggctatcaggacagaggaggtcgagac
catggagacaatctcaaccaacaaatgggtcggatgggtctcggcggagggagaggtgac
ggtggcaacatatatgctcaacagcgcgatggtccacgtccgcaacgctccgcagctgga
atggccaacccaggagatctggctggctcggccgatcatcccaacatgccggtagccaag
aaggatctcgctcacaactcacagacatttgccaagcgtcccgacacatctgcctacgac
aatccacgatgcggaaccaaaatcgagctgcttactaaccacagtctggttcacttgcca
cacgaaccaataaagctgtttgagtacaacatcgacgtgttcaaaggacgaaagaagctc
gagaaacgcgaggaagcgggtccgatgttccgcgagattgcgagtacatcggagagaaag
gacttagcatcattcaccgaatatgtgtacaacgacgtcaacttgctatggtcaatgaag
tctctcccacgttctgagggaccagtcagcgggaagaacggctacatctactacaagttc
actcgtgtcgttgagctgggatccgaggtcaggaatcaggatagtcagctgctgtcaaca
ctggttgatgccatcgccactgctagagttagatggccaaaaaggactggaaaccagttc
agtgtcttcaagcgctccatctttttgctccaaaaccgcgtggacgacggagcttttggc
gatgcaccgatcttcgttaagcttcgcaatggagtcgacgcgcgtattggagtctccatg
ggcatcaagctgaaccttcgtgtcggaatcactgcttgttttgatgtgtcccacacactc
ttcacccgtcccggctacccgctggtccgtctgttctgggagctcatccacggcgacacc
ctcaccgatgaggaaatcgtcgagggcaactgggatgccgacatgaagttggctcggccc
acaggccaaaacatcaaactaatgagcgacgtcctcaaagacatgagaataatgttcacg
aacaaagacggtttgaagttcgacgagaagggtaattatgaggagagagatttgaaaagg
ctgaaagaaaagaagccgacgaagggaaacaccaaaaagactttgtacccattggaagtt
tgtagtttgctgattgaccccgtgagatatacgggtcttattaccgagaagctcaagggc
aatatgattcaatacaccacgttgaaagctgagcaacggaagctggtccttcagaacatc
attggacagaaggcaattggcgattgcccacccatcgtggataacaatgatcgatacatg
acgggccatggcattaccatcgacaaagagatgctaaccgtcaaagcttgtctcttgcca
cctccaaaagttgtatatggcaactccgagttcctagattcggaacatcttggagagtgg
gaagctgtcacccatgatccagtgagaacagtcctcgatgacgccatatacgtgagaagc
agagttccgggtgctccgaagctgaagaaaaggattctgggatgtattctcaaaattgga
agcccgatgaattcctcagttgacttcggcatcgacgatatgtgttatcacaatctgatg
aaagcgatcgaggcagcagggcaaccagtttgttgggccaacagggacatgggacaagct
gtgatccacgcgagcgaggagtacttgcaaggacgggatctgccaggtgtcaagttggat
tggatgagaaacctcaataatgagaatttggattcgtataagcagtcggaggatgaggtc
atcgtgccattggtcctgatgatcttccaagtgagattcactacgttgaattgtgagaga
tccgagttccagaacgactacaatctcttcaagtggatggctgacaatgaggtcggagtg
ttcactcaaggtctcctgtacaagaccttcaactccattgggaacactccagcctcatgc
aggttcacgaggctcattgtggagaagatcctcggaaagatcggcacaacccatcgtcgc
ctggagcgcgatggagatcacaagtcatggaaaaaacttgtgaatcctgcggagccaacc
ctctttcttggagtcgacgtgtcgcatccaagtgctcgcgacctgaaaggagacgatccg
gtaaaacgcctttctgtggccacagtcgtcggaaatattgacctggactgtaccgaatac
agagcgtcttccaaactccaggacgttggagaagagagaatcgtccgattccaagaggag
atccaaaagagaattggagagtttgtccaatttaatggaatctccccggcacacatcgtc
atctaccgagatggtctctccgagggagacttccaacgaacgctttatgaggagaaaacg
gctgtggagaccgcctgcaagcaatttggtccaggattcaaaacaacactcacctacatc
gttgtcaccaaacgacaccataccagattcttcctgaaggatgaggaacaaggactcgag
cagcaaggatacaacattcgtccgggaaccctcgtggaggatactgtcaccaccaacgac
tactacgatttcttcctaaccactcaagtcggtcaggttggtctggcgcggccgacccac
tactacgtcctcttgaacgattgggatgtgccagcaacgttctggcctaccgtaacccac
gctctgacgtatttgttctgccgcaccaccagcactgtcactctgccagcaccagtgctc
tacgcgcatttggcagcgaaaagagccaaggagactatggatggagctctctttgcgaat
cgaggagttggtcgagttttcgacctttcccaattcagcgaacttgctcaactgacaaat
tgtcttcagtcaaatccgtcactggatgggatgacgttcgtctaa

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