Caenorhabditis briggsae (nematode): CBG_17887
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Entry
CBG_17887 CDS
T01054
Symbol
Cbr-ergo-1.2
Name
(RefSeq) Protein CBR-ERGO-1.2
KO
K11593
eukaryotic translation initiation factor 2C
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr04361
Axon regeneration
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09150 Organismal Systems
09158 Development and regeneration
04361 Axon regeneration
CBG_17887 (Cbr-ergo-1.2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbr03019
]
CBG_17887 (Cbr-ergo-1.2)
03036 Chromosome and associated proteins [BR:
cbr03036
]
CBG_17887 (Cbr-ergo-1.2)
Messenger RNA biogenesis [BR:
cbr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
CBG_17887 (Cbr-ergo-1.2)
Chromosome and associated proteins [BR:
cbr03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
CBG_17887 (Cbr-ergo-1.2)
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
CBG_17887 (Cbr-ergo-1.2)
microRNA pathway
RISC loading complex
CBG_17887 (Cbr-ergo-1.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoL2
Motif
Other DBs
NCBI-GeneID:
8589696
NCBI-ProteinID:
XP_045096329
WormBase:
CBG17887
LinkDB
All DBs
Position
V:<5707659..>5713664
Genome browser
AA seq
1174 aa
AA seq
DB search
MSNYNRGYDDNRRDGGGGDRRGGYDNQRGNDDYRDGGYQDNRGGNRDYRGNDRGGYENRD
GGYQDNRDGNRDYRGNDRGGYENRDGGYQDNRDGNRDYRGNDRGGYENRDGGYQDNRDGN
RDYRGNDRGGYDHRDGGYQGNRDNYRGGNDNRDGGYRGGNDNYRGNDNYRGNDDRRGYQD
RGNQGGYQDRGGYQDRGGRDHGDNLNQQMGRMGLGGGRGDGGNIYAQQRDGPRPQRSAAG
MANPGDLAGSADHPNMPVAKKDLAHNSQTFAKRPDTSAYDNPRCGTKIELLTNHSLVHLP
HEPIKLFEYNIDVFKGRKKLEKREEAGPMFREIASTSERKDLASFTEYVYNDVNLLWSMK
SLPRSEGPVSGKNGYIYYKFTRVVELGSEVRNQDSQLLSTLVDAIATARVRWPKRTGNQF
SVFKRSIFLLQNRVDDGAFGDAPIFVKLRNGVDARIGVSMGIKLNLRVGITACFDVSHTL
FTRPGYPLVRLFWELIHGDTLTDEEIVEGNWDADMKLARPTGQNIKLMSDVLKDMRIMFT
NKDGLKFDEKGNYEERDLKRLKEKKPTKGNTKKTLYPLEVCSLLIDPVRYTGLITEKLKG
NMIQYTTLKAEQRKLVLQNIIGQKAIGDCPPIVDNNDRYMTGHGITIDKEMLTVKACLLP
PPKVVYGNSEFLDSEHLGEWEAVTHDPVRTVLDDAIYVRSRVPGAPKLKKRILGCILKIG
SPMNSSVDFGIDDMCYHNLMKAIEAAGQPVCWANRDMGQAVIHASEEYLQGRDLPGVKLD
WMRNLNNENLDSYKQSEDEVIVPLVLMIFQVRFTTLNCERSEFQNDYNLFKWMADNEVGV
FTQGLLYKTFNSIGNTPASCRFTRLIVEKILGKIGTTHRRLERDGDHKSWKKLVNPAEPT
LFLGVDVSHPSARDLKGDDPVKRLSVATVVGNIDLDCTEYRASSKLQDVGEERIVRFQEE
IQKRIGEFVQFNGISPAHIVIYRDGLSEGDFQRTLYEEKTAVETACKQFGPGFKTTLTYI
VVTKRHHTRFFLKDEEQGLEQQGYNIRPGTLVEDTVTTNDYYDFFLTTQVGQVGLARPTH
YYVLLNDWDVPATFWPTVTHALTYLFCRTTSTVTLPAPVLYAHLAAKRAKETMDGALFAN
RGVGRVFDLSQFSELAQLTNCLQSNPSLDGMTFV
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgagcaactacaacagaggatacgatgacaatcgtcgcgatggtggtggcggagatcgc
cgtggtggttatgataaccaaagaggcaatgacgactacagagacggaggctaccaggat
aatcgtggtggcaatcgtgactacagaggaaacgaccgtggcggatacgagaacagagat
ggtggctaccaggacaatcgtgacggcaatcgtgactacagaggaaacgaccgtggcgga
tacgagaacagagatggtggctaccaggacaatcgtgacggcaatcgtgactacagagga
aacgaccgtggcggatacgagaacagagatggtggctaccaggacaatcgtgacggcaat
cgtgactacagaggaaacgaccgtggcggctacgaccatagagatggaggctaccaagga
aaccgtgataactacagaggtggaaatgataacagagacggcggctaccgtggcggcaac
gacaactacagaggcaacgacaactacagaggcaacgacgatcgccgaggataccaagac
cgtggcaaccagggaggctaccaagaccgtggaggctatcaggacagaggaggtcgagac
catggagacaatctcaaccaacaaatgggtcggatgggtctcggcggagggagaggtgac
ggtggcaacatatatgctcaacagcgcgatggtccacgtccgcaacgctccgcagctgga
atggccaacccaggagatctggctggctcggccgatcatcccaacatgccggtagccaag
aaggatctcgctcacaactcacagacatttgccaagcgtcccgacacatctgcctacgac
aatccacgatgcggaaccaaaatcgagctgcttactaaccacagtctggttcacttgcca
cacgaaccaataaagctgtttgagtacaacatcgacgtgttcaaaggacgaaagaagctc
gagaaacgcgaggaagcgggtccgatgttccgcgagattgcgagtacatcggagagaaag
gacttagcatcattcaccgaatatgtgtacaacgacgtcaacttgctatggtcaatgaag
tctctcccacgttctgagggaccagtcagcgggaagaacggctacatctactacaagttc
actcgtgtcgttgagctgggatccgaggtcaggaatcaggatagtcagctgctgtcaaca
ctggttgatgccatcgccactgctagagttagatggccaaaaaggactggaaaccagttc
agtgtcttcaagcgctccatctttttgctccaaaaccgcgtggacgacggagcttttggc
gatgcaccgatcttcgttaagcttcgcaatggagtcgacgcgcgtattggagtctccatg
ggcatcaagctgaaccttcgtgtcggaatcactgcttgttttgatgtgtcccacacactc
ttcacccgtcccggctacccgctggtccgtctgttctgggagctcatccacggcgacacc
ctcaccgatgaggaaatcgtcgagggcaactgggatgccgacatgaagttggctcggccc
acaggccaaaacatcaaactaatgagcgacgtcctcaaagacatgagaataatgttcacg
aacaaagacggtttgaagttcgacgagaagggtaattatgaggagagagatttgaaaagg
ctgaaagaaaagaagccgacgaagggaaacaccaaaaagactttgtacccattggaagtt
tgtagtttgctgattgaccccgtgagatatacgggtcttattaccgagaagctcaagggc
aatatgattcaatacaccacgttgaaagctgagcaacggaagctggtccttcagaacatc
attggacagaaggcaattggcgattgcccacccatcgtggataacaatgatcgatacatg
acgggccatggcattaccatcgacaaagagatgctaaccgtcaaagcttgtctcttgcca
cctccaaaagttgtatatggcaactccgagttcctagattcggaacatcttggagagtgg
gaagctgtcacccatgatccagtgagaacagtcctcgatgacgccatatacgtgagaagc
agagttccgggtgctccgaagctgaagaaaaggattctgggatgtattctcaaaattgga
agcccgatgaattcctcagttgacttcggcatcgacgatatgtgttatcacaatctgatg
aaagcgatcgaggcagcagggcaaccagtttgttgggccaacagggacatgggacaagct
gtgatccacgcgagcgaggagtacttgcaaggacgggatctgccaggtgtcaagttggat
tggatgagaaacctcaataatgagaatttggattcgtataagcagtcggaggatgaggtc
atcgtgccattggtcctgatgatcttccaagtgagattcactacgttgaattgtgagaga
tccgagttccagaacgactacaatctcttcaagtggatggctgacaatgaggtcggagtg
ttcactcaaggtctcctgtacaagaccttcaactccattgggaacactccagcctcatgc
aggttcacgaggctcattgtggagaagatcctcggaaagatcggcacaacccatcgtcgc
ctggagcgcgatggagatcacaagtcatggaaaaaacttgtgaatcctgcggagccaacc
ctctttcttggagtcgacgtgtcgcatccaagtgctcgcgacctgaaaggagacgatccg
gtaaaacgcctttctgtggccacagtcgtcggaaatattgacctggactgtaccgaatac
agagcgtcttccaaactccaggacgttggagaagagagaatcgtccgattccaagaggag
atccaaaagagaattggagagtttgtccaatttaatggaatctccccggcacacatcgtc
atctaccgagatggtctctccgagggagacttccaacgaacgctttatgaggagaaaacg
gctgtggagaccgcctgcaagcaatttggtccaggattcaaaacaacactcacctacatc
gttgtcaccaaacgacaccataccagattcttcctgaaggatgaggaacaaggactcgag
cagcaaggatacaacattcgtccgggaaccctcgtggaggatactgtcaccaccaacgac
tactacgatttcttcctaaccactcaagtcggtcaggttggtctggcgcggccgacccac
tactacgtcctcttgaacgattgggatgtgccagcaacgttctggcctaccgtaacccac
gctctgacgtatttgttctgccgcaccaccagcactgtcactctgccagcaccagtgctc
tacgcgcatttggcagcgaaaagagccaaggagactatggatggagctctctttgcgaat
cgaggagttggtcgagttttcgacctttcccaattcagcgaacttgctcaactgacaaat
tgtcttcagtcaaatccgtcactggatgggatgacgttcgtctaa
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integrated database retrieval system