Caenorhabditis briggsae (nematode): CBG_17980
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Entry
CBG_17980 CDS
T01054
Symbol
Cbr-pal-1
Name
(RefSeq) Protein CBR-PAL-1
KO
K09312
homeobox protein CDX1/4
Organism
cbr
Caenorhabditis briggsae (nematode)
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cbr03000
]
CBG_17980 (Cbr-pal-1)
Transcription factors [BR:
cbr03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
CBG_17980 (Cbr-pal-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
HTH_NDX
Motif
Other DBs
NCBI-GeneID:
8584037
NCBI-ProteinID:
XP_002642043
WormBase:
CBG17980
UniProt:
A8XSQ8
A0AAE9JD29
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All DBs
Position
III:complement(7217585..7220647)
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AA seq
271 aa
AA seq
DB search
MSVDVKSEFSENDSSSSSSSPTNVNNVAWPNYQMMPFMNAQPLRDKMLQPSFDPQLYGRW
PQMGEAGFYGHSDIYSTFALPQLSTNGQILPTAEVVEVKPPLSNGSSSSDSGMYPSPNDL
TPFPSTSSGIGASSSSSDLQAAAAAAANYQMRAATCYQQSVWPFMDYQQPFPWKMPLGSA
GKERRASSDTKSLPTGPGTNNVRVRTADKYRMVYSDYQRLELEKEFHTSAFITSDRKSQL
STMLSLTERQIKIWFQNRRAKDRRDKQKIRL
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtcgatgtcaaatccgagttttctgagaacgattcttcttcgtcttcgtcgtca
ccaaccaatgttaacaacgttgcatggcctaactatcaaatgatgccgttcatgaatgca
caaccgctaagagataaaatgttacaaccttcgttcgatccacagctctatggaagatgg
ccacagatgggcgaagcaggattctatggtcattccgacatctactcaacattcgcactt
ccccagttatcaaccaacggccaaatactcccaacggcggaagttgttgaagtgaagcct
ccactatcgaacggaagcagtagcagtgatagtggaatgtatccatctccaaacgacttg
actccattcccatcgacgtcttctggcattggggcgtccagttcatcgtcggatcttcaa
gcggcggctgccgctgccgctaactatcagatgagagcggcaacatgttaccaacaatcc
gtttggcctttcatggactatcaacagccgttcccctggaaaatgccactgggtagcgct
ggaaaggaacggagagcaagcagtgacacgaagtccttgccgacaggcccaggaacgaac
aatgttcgtgtgcggacggccgacaagtatcgaatggtttactcagattatcaacgattg
gagttggagaaagagttccacacatcggctttcataacttcggatcggaagtctcagctg
tcaacaatgctgagcttgacagaacgacaaatcaaaatttggttccagaatcgacgcgcg
aaggatcgtcgtgacaagcagaagatacgactctaa
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