Caenorhabditis briggsae (nematode): CBG_18251
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Entry
CBG_18251 CDS
T01054
Symbol
Cbr-taf-9
Name
(RefSeq) Protein CBR-TAF-9
KO
K03133
transcription initiation factor TFIID subunit 9B
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CBG_18251 (Cbr-taf-9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cbr03021
]
CBG_18251 (Cbr-taf-9)
03036 Chromosome and associated proteins [BR:
cbr03036
]
CBG_18251 (Cbr-taf-9)
Transcription machinery [BR:
cbr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
CBG_18251 (Cbr-taf-9)
Coactivators
SAGA/TFTC/STAGA complex
CBG_18251 (Cbr-taf-9)
Chromosome and associated proteins [BR:
cbr03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
CBG_18251 (Cbr-taf-9)
STAGA complex
CBG_18251 (Cbr-taf-9)
TFTC complex
CBG_18251 (Cbr-taf-9)
SAGA complex
CBG_18251 (Cbr-taf-9)
SLIK complex
CBG_18251 (Cbr-taf-9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIID-31kDa
EF-hand_14
TAF
CENP-S
Motif
Other DBs
NCBI-GeneID:
8584257
NCBI-ProteinID:
XP_002642263
WormBase:
CBG18251
UniProt:
A8XS90
A0AAE9DB13
LinkDB
All DBs
Position
III:5527228..5528120
Genome browser
AA seq
184 aa
AA seq
DB search
MAEPGEKDAELSTGGPDTFSKEAMAIMSLLGECGVEEFDPRVVSMLMDVQYAVTSKILQV
SSGLSRHADKQKIDSEDVQTAADMLGVLSSNAPDREKILQMANDKNQQPLPQIRHNYGLK
LPNDRFCQLQQNFVYKADDNSQQMETQQVAHTPRIIEPPQSSVLRPEQVQNMLKRRAPDD
DFDS
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaccgggagaaaaagacgcagaactatcaacaggtggaccagacacattcagt
aaagaagctatggcaattatgagtttactcggtgaatgtggagtcgaggagtttgaccca
cgcgttgtttcaatgctaatggatgttcaatacgcagtcacatcgaagattcttcaagtt
tccagtggactctcaagacacgccgataaacagaaaatcgattcagaagacgtgcaaacg
gcagccgatatgctcggcgttctctcatcgaacgctcccgacagagaaaaaattctacaa
atggccaacgacaaaaatcagcaaccacttccgcaaatacgacacaactatggattgaaa
ctaccgaacgatcgattctgtcaactacaacaaaactttgtatacaaagcagacgataat
agtcagcaaatggaaacgcagcaagttgctcacaccccacgcatcatcgagccaccacag
tcatcagtcttgaggcccgagcaagtccagaatatgctcaagcgaagagctcctgatgat
gatttcgattcatga
DBGET
integrated database retrieval system