Caenorhabditis briggsae (nematode): CBG_18273
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Entry
CBG_18273 CDS
T01054
Symbol
Cbr-rle-1
Name
(RefSeq) Protein CBR-RLE-1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
cbr
Caenorhabditis briggsae (nematode)
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cbr03000
]
CBG_18273 (Cbr-rle-1)
04121 Ubiquitin system [BR:
cbr04121
]
CBG_18273 (Cbr-rle-1)
Transcription factors [BR:
cbr03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
CBG_18273 (Cbr-rle-1)
Ubiquitin system [BR:
cbr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
CBG_18273 (Cbr-rle-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_UBOX
zf-RING_10
zf-RING_5
zf-C3HC4_4
PaaA_PaaC
Motif
Other DBs
NCBI-GeneID:
8584278
NCBI-ProteinID:
XP_045096430
WormBase:
CBG18273
LinkDB
All DBs
Position
III:5437242..5440546
Genome browser
AA seq
1001 aa
AA seq
DB search
MAPTGQGGQWQEVLCCSVCNKHFNESFLPVSLICGHVICRKCAEKPESQLKPCPHDDWKT
TIPPSEYPNNVALLSVIYPRKQCMIFSGANTDDEKRIDHLSIQIAKFFREADSERGGTVS
SREISRTLQRKVLALLCYQWRENDGRLKTFKMCRGISERVMIEIILSIQSNTHVSSQLWS
AVRARGCQFLGPAMQDDVLRLILMTLETGECIARKNLVMYVVQTLASDYPQVSKTCVGHV
VQLLYRASCFNVLKRDGESSLMQLKEEFRTYDALRREHDSQIVQIAFESGLRIGPDQWSA
LLYADQSHRSHMQSIIDKLQSRNTYQQSVDELKILFNSQSPFVQIPAYRNFLTQVIPCLE
YFGTIDQETITMSIVAESLYQIKKILRLHCSHDDLRRMPKEERRALLTQGMMPPPPPLYP
LYTHLDENGRSVSRTEFNKPVENVRENTPSHTPPNSKQPTTSQQQQPQQQGGQGQFTPRQ
KRYQMGIPPNRMGYASQHHHFTPGPQQIPQQYYNPQPMQPPPMQRVRGRRMNGLPPPRPG
CMPMMFPYSPEMMPPAGVPQNGTVPLMQTANVVTADGTVVNGTPQRVMIMQSPTHMNQGP
VVMVIRKYNSLNDQEFVLDPATTNGSFTNAGSNGCHDSISSCSNSSSHVDCHVTNWQYDL
PDGFTTWSTSAHNLDANFRKMYTHFSFRTDGNMFPMFDSGNCWGTTGADAEQLLAKRNEI
LKRLHTSEEDDEPEDSGIGHVSYTVASSVLDDRFQTQKFKFYITFHYRMDHIPIQMIPVP
TIDLPPIPISFASMPNDETMTMIGEMVQQNRPRAPSLTNQTTGQPIIAAVGSAAPATVQS
DCGTMSVMDSICMPIATSVIHTSTGIAQPVMPMVPVVPVQVPVVPAESFNPSVPPPPTPG
QPMLVDTATGLLTPIRPILVPHPQNVVSNSLDKIVDVKERLSEAQGNVSEAENAHLRMEL
RMAESEMAHLDPYTKNNCLLRELHQVDMELQQLHINPAVEG
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
atggcaccaacgggtcaaggcgggcaatggcaggaagtgctgtgttgttcggtttgtaac
aaacattttaatgaatcattcctcccggtgagtttgatttgcggtcatgtcatatgccgc
aaatgtgctgagaaaccagaaagccaattgaaaccatgcccccatgatgattggaagaca
accattccaccatcagaataccccaacaacgtggcgcttctatctgtcatctaccctcgg
aaacaatgcatgatattttctggagcaaatactgacgatgaaaaacgaatcgatcatctt
tccatccagatcgccaagttttttagagaagctgatagtgaaagaggtggaactgtgtcc
agtagagagatatcccgaacacttcaacgaaaagttctggctctactttgctaccaatgg
cgggaaaatgatggtcgtctgaagacattcaaaatgtgtcgaggaattagtgaacgagtg
atgattgaaattattttatcgatacaaagcaacacgcatgtcagcagccaattatggtca
gcggtgcgagctcgtggttgtcagtttctcggacccgcgatgcaagatgatgtccttcgt
ctgattctgatgacgttggagactggagagtgtatagctcggaagaatcttgtgatgtac
gttgtgcaaactcttgcctctgactatccccaagtatcgaaaacttgtgttgggcacgtg
gttcaacttctttaccgtgcttcgtgcttcaatgttctcaaacgagatggagaatcgtcg
ttgatgcagttaaaagaggaattcagaacttatgatgctttgcgtagagaacatgattcg
caaatagtgcaaatagcattcgaatcaggactgcgtattggtcccgatcaatggtcagct
cttctgtatgcagatcagtctcaccgttctcatatgcaatccattatcgacaagttgcag
tcgcggaatacataccaacaaagtgtcgatgagctgaaaattcttttcaactcacaatcg
ccgtttgtacaaatacctgcataccggaattttctgactcaagtgatcccttgtctggag
tattttggaacaatcgatcaggaaaccataacgatgtcgattgtcgctgaaagtttgtat
caaatcaagaagatccttcgtctccactgttcgcacgatgatttgagaaggatgcccaag
gaagaacgaagagcattactgacacaaggaatgatgcctcctcctccgccactctatccc
ctctacactcatcttgatgaaaatgggagatctgtgagcagaactgaattcaacaaaccc
gtagaaaatgtcagagagaatacaccgtcccatactccaccgaattccaagcagccaaca
acttcacagcaacaacaaccacagcaacaaggaggacagggacaattcacgccacgacag
aaacggtatcaaatgggaatcccaccaaaccgaatgggctacgcttcacaacatcatcat
ttcacccctggaccacaacagataccacagcaatactataatcctcaaccaatgcaacca
ccaccaatgcaaagagttcgaggacgacgaatgaacggattaccaccacctcgtccagga
tgcatgcctatgatgtttccttattctccagaaatgatgcctccagctggagtaccacag
aatgggacggttcctcttatgcaaacagctaacgtagtgaccgctgatggtacagtagtc
aatggaacaccacaaagggttatgatcatgcaatcacctactcatatgaatcagggacca
gttgtcatggtaattcgaaaatataatagtctgaatgatcaagaatttgttttagatccc
gccacaacaaatgggtccttcacaaacgccggttccaatgggtgccatgactccatcagt
tcctgttcaaattcctccagccatgtggactgccacgtcaccaactggcagtatgatctt
cccgacggcttcaccacctggtcaacatccgcacacaatttggatgcaaactttcggaaa
atgtatactcatttcagtttcagaaccgacggtaacatgttccctatgtttgacagcgga
aattgttggggaacaactggtgctgatgctgaacaacttctggctaaaagaaacgagatc
ttgaaacgcttgcatacgtctgaagaagacgatgagcctgaagacagtggcattggacac
gtttcttacactgtcgcttcttcggttcttgatgacaggtttcaaactcaaaaattcaag
ttctacattacttttcattacagaatggaccatattccaattcaaatgatacctgttcca
accatagaccttccgcccattccaatcagttttgcctcaatgccgaatgatgaaaccatg
acaatgataggggagatggtgcaacaaaatcgtcctcgtgctccgtcactaacgaatcag
acaaccggacaaccgataattgctgctgttggttccgcggctcctgctacggtccaatct
gattgtggtacgatgagtgtgatggatagtatttgtatgccgattgccacatcggttatt
catacttcaactggaattgcacagcccgtgatgcccatggttcctgttgttccagtccaa
gttccagttgttccagctgagagcttcaatccatcagtaccaccaccacctactcctgga
caaccaatgcttgtggacacagcaactggtttgctcactccaatcagaccaattctcgtg
cctcatccacaaaatgttgtttcgaattccctcgacaaaattgtggatgtcaaggagcgg
ctcagcgaagctcaaggaaacgtctccgaagccgaaaacgcccaccttcgcatggaattg
cgaatggctgaaagtgaaatggctcatctcgacccctacaccaagaataattgcttgctc
cgcgagcttcatcaagttgatatggaacttcagcagctccatatcaacccagccgtcgag
ggatag
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