Caenorhabditis briggsae (nematode): CBG_18299
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Entry
CBG_18299 CDS
T01054
Symbol
Cbr-oxi-1
Name
(RefSeq) Protein CBR-OXI-1
KO
K10588
ubiquitin-protein ligase E3 B [EC:
2.3.2.26
]
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
CBG_18299 (Cbr-oxi-1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cbr04121
]
CBG_18299 (Cbr-oxi-1)
Enzymes [BR:
cbr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
CBG_18299 (Cbr-oxi-1)
Ubiquitin system [BR:
cbr04121
]
Ubiquitin ligases (E3)
HECT type E3
CBG_18299 (Cbr-oxi-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
IQ
Legum_prodom
Motif
Other DBs
NCBI-GeneID:
8584301
NCBI-ProteinID:
XP_002642307
WormBase:
CBG18299
UniProt:
A8XSD4
LinkDB
All DBs
Position
III:5312198..5315837
Genome browser
AA seq
1072 aa
AA seq
DB search
MDNILRTLEKNAREREGEEIQRRRVELAEKLEPYIRGYLTRKKYKGKIKLFRPNFFNDFD
SLEKNNKTLLTVTEMLSKTPKVIETAKAQHDIKLLCNICRHIIISIDSTSKDVSFVAAFL
NKDTIKDATSLITSIFTQIPSVLNSLNPEKAADVKHWQCLIHFVIVFSSSSTWPLIRNAS
QVHPVLNGLCSKMMSVFYEHRNYEQFVSSLFVAVNGHKPPVNVETVNAQFSILYKPIKAN
NIDPPPEIFSIFVLKALTCPALLLHLNQQNIEQIKTTQCFEKTLTWLRTNQEEIESKMDV
RLLINMLANIVHFAFIDEQTLQTKVYEWTWAVGTMLSRCTELTVKHGDSKSSLQYWHPVF
GHYLLPIDKRTEGALKNVLYQLKMLWSSRVVKCLFRKIIENKSLSPCSTPSDNQSASKNQ
KDISAAFSKLWRKLGGTIDSVTSSKSDSEPPPNLIAIVCQVYMTALSTMVHMKGEIVSGL
CRDDQLLKQLWSYLREWGEKYGSSSGYLFSSSNAEQWGPVAASLQSLKRPNSPHTATLRL
FVDAASAIVSILDEEEIFEKGTPFSNKELESICKYVNIFCFRAIWSGAVDEATVNSTGLF
HSMHSLLTVLYERDSRRSFTNDPKFWLISEVKSSSLTIEYEKKSGKGVLMMRKMAHLVPI
KDRMLLFRRQVQDDKNRVATIQGDSQPQTWITVQRNRIIEDGFHHLSKVSLNQLKSTIRV
KFVNEQGLDEAGIDQDGVFKEFLELTLKKVFDPQMNLFSTTSTGVLYPSPTSSLHDDHLA
LFTFVGRMLGKAVYEGIVVDVTLAPVLLAAVLGNHRLCAFDELSQLDQELYRSLTFVKRY
EGDMADLSLTFSVDEDFMDKISTVDLVLSGRTIPVTNENKIDYVHRMAHHRVFRRTQEQC
KAFVSGMQSILQPSWLSLFAPNDLQCLISGVNSDVDLSDLKRNVQYFGGFHGNHRLIKWL
WDILENKFTSEERKLFLKFVTSCSRPPVLGFSYLEPPFSIRCVEVSDDQDQGDTLGSVVR
GFLALRKGTAATRLPTASTCFNLLKLPNYNKKSLLLEKLRYAIHAGTGFELS
NT seq
3219 nt
NT seq
+upstream
nt +downstream
nt
atggataacattttgcgaacgctcgagaagaatgcgagggaacgtgagggggaagagata
caaaggagaagagtcgagttggctgaaaagttggagccatatattcgaggatatttgacg
aggaagaaatataaaggaaaaattaaattatttcgaccaaacttcttcaatgactttgat
agcctagaaaagaacaacaaaactcttctaaccgtcacagagatgctctcaaagacacca
aaagtcatagagacagcaaaagcacaacacgatataaagctcctctgcaatatctgtcgc
catataattatatcaatcgattccacatcgaaagatgtcagttttgttgctgcttttctg
aacaaagacactatcaaagacgctacctcattgatcacttcgattttcacccaaattccc
tcggttctgaattccttgaaccctgaaaaagcggcagatgtgaagcattggcaatgtctc
atccattttgtaattgtgttctcatcgagttcaacatggccattgattcgaaacgcttct
caagttcatccggttctcaatgggttatgctcaaaaatgatgagtgtattttacgagcac
agaaactatgaacagtttgtgagctctctattcgttgctgtaaatggacataaacctcct
gtcaatgtggaaacggtaaatgctcaattctcgattctctacaagccaatcaaagcaaac
aatattgatccaccacctgaaatattttcaattttcgttctgaaggcgttgacatgtccg
gctcttctgcttcacttaaatcaacaaaatattgaacaaatcaaaacaacacaatgtttc
gaaaaaacgctcacctggctgagaacaaatcaggaagaaatcgagagtaaaatggatgtg
agacttctaatcaacatgttggccaacatagttcactttgcttttattgatgagcagacc
ctccaaacaaaggtttacgaatggacttgggcagtcggaactatgctatcgagatgtact
gaactcacagtcaaacatggagattcgaaaagcagcctacagtactggcatccagtattt
ggtcattaccttcttccaatcgacaaacgaaccgagggtgctctcaaaaacgtcctttat
cagctcaaaatgctctggagctcgcgagtcgtcaagtgtctattccggaaaataatagag
aacaaatcactttcaccatgctcaacgccttctgataatcagtcggcctcgaaaaatcag
aaagatatcagtgccgcgtttagtaaactttggagaaaactcggtggcactatcgactcg
gtaacctcatcgaaatccgacagtgaaccaccaccgaaccttattgctatagtgtgtcaa
gtatacatgactgcgttgagtacaatggtccatatgaaaggagaaattgtatccggattg
tgtagagacgaccagctattgaaacagttgtggtcatatttgagagaatggggtgaaaag
tatggaagttccagtggatatttgttcagctcctctaatgctgagcaatgggggcccgtg
gcagcttctcttcaatctctgaaaagacccaactccccacataccgccacacttcgtcta
tttgtggatgctgcatctgcaatcgtttcaattcttgacgaagaggaaatatttgaaaag
ggaactccattttctaataaggagcttgaatcaatttgtaaatatgtgaatatattttgc
ttccgtgccatctggagtggtgctgttgacgaagcaactgtaaacagtactggtctcttt
catagtatgcattcactgctcacagttctctatgaaagagatagtcgaagatcgttcacc
aatgatcccaagttttggctaatttcagaagtgaaatcatcgtcgttgactattgaatac
gaaaagaaatctggaaaaggagtgttgatgatgcgaaaaatggcacatttagttccaatc
aaagatcgaatgcttctattccgacgtcaagttcaagatgataaaaatcgagtggcaaca
atacaaggagattcgcaacctcaaacatggattactgtacagagaaatcgaataatcgaa
gacggattccatcatttatcgaaagtatcgttaaaccagttgaaatccacgatccgtgtc
aaatttgtcaacgagcaaggcctggatgaggctggaatcgatcaagacggagtgttcaag
gaattcctcgaattgactctcaaaaaagtatttgatccacagatgaatcttttttctaca
acttccacgggagttttgtatccgtcccccacttcatctctccatgatgatcatcttgct
ctattcacattcgttgggagaatgctcggaaaagcagtttacgaagggattgtcgtggat
gtgacactggctccagttcttctcgcagccgttctcggaaatcatcgattatgtgcattt
gatgaattgagtcaacttgatcaggaactatatcgaagcttaacttttgtgaaaagatat
gaaggagacatggcggacctttcactgacattttcggttgatgaggattttatggataaa
atctcgacagttgacttggtccttagcggaagaacaattcctgttacgaatgaaaacaaa
attgattacgttcatcgaatggctcatcatcgtgtatttcgtagaactcaggaacaatgt
aaagcatttgttagtgggatgcaatcaattcttcaaccatcatggctttcactgtttgca
ccgaatgacttacaatgcttgatcagtggagtcaactcagacgtcgatctatcagatttg
aaacgcaatgtacaatattttggcggattccatggaaaccatcgattgatcaagtggctc
tgggatattcttgaaaacaaattcacttccgaagaacggaaactatttttgaaatttgtc
acatcctgctctcgtccaccagttctcggtttttcgtacctagaaccaccgttttcaatc
cgatgtgttgaagtctcggatgatcaggatcaaggtgatacacttggaagcgttgttcga
ggctttctggcattgagaaaaggaaccgctgctactcgtctacccactgcgtctacttgt
ttcaatttgctgaagttacccaactataataaaaaatcgctgttactcgagaagcttcga
tatgcaattcatgcaggaacaggtttcgaattgtcctaa
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