Caenorhabditis briggsae (nematode): CBG_18316
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Entry
CBG_18316 CDS
T01054
Name
(RefSeq) Protein CBG18316
KO
K11131
H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-]
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CBG_18316
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cbr03009
]
CBG_18316
03032 DNA replication proteins [BR:
cbr03032
]
CBG_18316
Ribosome biogenesis [BR:
cbr03009
]
Eukaryotic type
Sno RNPs
Box H/ACA snoRNPs
CBG_18316
Prokaryotic type
CBG_18316
DNA replication proteins [BR:
cbr03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
Dyskerin complex
CBG_18316
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DKCLD
TruB_C_2
PUA
TruB_N
UPF0113
Motif
Other DBs
NCBI-GeneID:
8584315
NCBI-ProteinID:
XP_002642321
WormBase:
CBG18316
UniProt:
Q60YA8
A0AAE9JAW8
LinkDB
All DBs
Position
III:5226445..5227926
Genome browser
AA seq
445 aa
AA seq
DB search
MGKKDKRSKLEGDELAEAQQKGSFQLPSSNETAKLDASQWPLLLKNYDKLNVRTNHYTPH
VEGVSPLKRDIKNYISSGFFNLDKPSNPSSHEVVSWIKRILRCEKTGHSGTLDPKVSGCL
IVCIDRTTRLAKSQQGAGKEYICIFKLHEEVEDERKVKQALEKLTGALFQRPPLISAVKR
QLRIRTVYENKFIEYDPAQQMGIFNCICESGTYVRTICVHLGLILGCGGQMQELRRNRSG
ICDENENMVTMHDVLDAQYMLDTQKDESYMRHIVRPLEALLTQHKRVVVKDSCVNAICYG
AKILIPGILRYDDDIEVGKEIVIMTTKGEAICIAIAQMSTSTIASVDHGIVAKSKRVIME
RDVYGRKWGLGPVASKKKQMVKDGLLDKFGKPNITTPKSWAKEYVQTDKVKKEQEDKEDE
EEEEAPKKKSKKAAKKEVSSSSDSE
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgggcaagaaagacaagcgctccaagctcgagggtgacgagcttgccgaagctcaacag
aaaggatctttccaacttccatcatcgaacgaaacagccaaactcgatgcttctcaatgg
cctcttttgctgaagaactacgacaagctcaacgttcgtaccaaccactacacacctcac
gttgaaggagtttctccactcaagcgtgatatcaaaaactacatctcatctggtttcttc
aacctcgacaaaccatccaacccatcgtctcatgaggtcgtttcctggatcaagagaatt
cttcgctgtgaaaagaccggacacagtggaacactcgatccaaaagtttctggatgcctc
atcgtttgcatcgatcgtacaacccgattggcaaagtcgcagcaaggagctggtaaagaa
tacatctgcatcttcaagctccacgaggaagttgaggatgagcgcaaggtgaagcaagct
cttgagaagctcactggagctttgttccaacgcccaccactgatctctgctgtcaagaga
cagcttcgtattcgtactgtctacgaaaacaaattcatcgaatatgatccagctcaacaa
atgggaattttcaactgcatttgcgagtctggaacctatgtccgtacaatctgcgttcac
cttggtctcattcttggttgcggaggacaaatgcaggaacttcgaagaaacagatccgga
atttgtgatgaaaacgagaacatggtcactatgcatgacgtcctcgacgctcagtatatg
ctggacacccaaaaggatgaaagctacatgcgacacatcgtccgtccacttgaagctctt
cttacacagcacaaaagagttgttgtgaaggacagttgcgttaacgcaatttgttatgga
gccaagatcctcattcctggaattcttcgctacgatgatgacatcgaagttggaaaggag
atcgtcattatgacgaccaagggagaagcaatctgcatcgctatcgctcagatgagcact
tccactattgcttcagtcgaccatggaatcgtagctaagtcgaaacgtgtgatcatggag
cgggacgtctatggaagaaagtggggactgggaccagtagcctcaaaaaaaaagcagatg
gtcaaggatggacttctcgacaaatttggaaagccaaacatcaccaccccaaaatcgtgg
gccaaggagtacgtgcaaactgataaggtgaagaaggaacaagaggacaaagaagatgaa
gaggaggaagaggctccaaaaaagaagtcgaagaaagcagcgaagaaagaagtgtcgagc
agcagcgacagtgaataa
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