Caenorhabditis briggsae (nematode): CBG_18823
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Entry
CBG_18823 CDS
T01054
Name
(RefSeq) Protein CBG18823
KO
K19619
tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-]
Organism
cbr
Caenorhabditis briggsae (nematode)
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbr03400
]
CBG_18823
DNA repair and recombination proteins [BR:
cbr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
CBG_18823
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
UBA_8
UBA_4
Exo_endo_phos2
TAP_C
DUF7746
Motif
Other DBs
NCBI-GeneID:
8588435
NCBI-ProteinID:
XP_045096589
WormBase:
CBG18823
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All DBs
Position
I:12759555..12763795
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AA seq
337 aa
AA seq
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MSSSDNDEPKVVEISDDEMECEGVVEVNNEQSDEAKMREFAEITATDEIMAQSILQDVGW
DLKRALDVFFGSDAFKETRNEAVMGPSSSAGFELSLMSWNIDGLDGRSLATRMKAVATIV
KKVNPDILFLQEVVDRDLEPIDKLQSLYKIYYSNKGCQYYTAILVSKMFEVEKHDVVHFQ
NSGMYRTLQIVEGSIGGMKVFLVNTHLESMRDHRAQRMAQFSFCMDRCAEIIANNPGCFL
FFGGDLNLRDEEISSIPDGVLDAWVSAGCDTKTKWTWDTYKNDNKQGFNGAKMRFDRIYW
HGPFNQVHFSLEGRQRIRSCLCFPSDHWAINATFSAV
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagttctgataatgacgagccgaaagtggtggaaatttccgatgatgaaatggag
tgtgaaggtgttgtagaagtgaacaatgagcaatctgacgaggcgaaaatgcgagaattc
gccgaaatcacggctaccgacgagataatggctcagtcgattctccaagacgttggatgg
gatttaaaacgagcactggacgtgttttttggctccgacgcgtttaaagagacgagaaat
gaagctgtgatgggtccgagctcatcggcgggcttcgagctcagtctcatgtcgtggaac
attgatggactcgatgggcggagcctggcgacacggatgaaagcggtggcgactattgtc
aaaaaagtcaacccggacattctcttccttcaagaagtcgtcgatcgtgatttggagcca
atcgataagctccaatcactctataaaatctactattccaacaagggatgtcagtattat
acggcgattttggtgtcgaaaatgttcgaagtcgaaaagcatgatgtcgttcattttcag
aattccggaatgtatcgaacacttcagatcgtcgaaggctccatcggtggaatgaaggtg
ttccttgtgaatacccatctcgaatcgatgcgtgatcatcgtgctcaacgcatggctcaa
ttcagtttctgtatggatcgttgcgctgaaatcattgccaataaccccggatgtttcctg
tttttcggcggcgatttgaatttgagagatgaggaaatttcgagtattccagatggcgtc
ctggatgcgtgggtgtcggcaggatgcgatacgaagaccaaatggacgtgggacacttat
aaaaatgacaataaacagggctttaatggcgcgaaaatgagattcgaccgtatctactgg
catggaccattcaatcaagtgcatttctcgctggaaggccgtcaacgcattcgttcgtgt
ctctgcttcccatcggatcattgggccattaatgccacgttttcggctgtataa
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