Caenorhabditis briggsae (nematode): CBG_18961
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Entry
CBG_18961 CDS
T01054
Symbol
Cbr-dre-1
Name
(RefSeq) Protein CBR-DRE-1
KO
K10297
F-box protein 11
Organism
cbr
Caenorhabditis briggsae (nematode)
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cbr04121
]
CBG_18961 (Cbr-dre-1)
Ubiquitin system [BR:
cbr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
CBG_18961 (Cbr-dre-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta_helix
NosD
F-box-like
F-box
zf-UBR
Motif
Other DBs
NCBI-GeneID:
8579273
NCBI-ProteinID:
XP_045096623
WormBase:
CBG18961
LinkDB
All DBs
Position
V:complement(12257927..12269508)
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AA seq
1045 aa
AA seq
DB search
MMSEEAPADNVLLGSRPTLVSTRAAHLSPKLQRRGSSSARKFASRNSTPANQRVTRRLTR
SSVSTSCVASEGSMSSSVGPEEMSSSSSSPYFHPPTPQQVLDDSSQQSPSYSQDSNSPEQ
HTFESMESSEGGTPSRYSPSGRSDIDNPSLGLYSAQGSYPYSLRKRRPCCTKDEDLCFPI
AAATADETPQPTMKKFKLECLSPGEARKDFSIDDEIKVENAHTIEVMDDEDQEDYINTLP
DELLLKVFSFLPDKSLLACSSVCYRFNQISNSHEVWKELYLSLYDYRIPLFHPSHAKFEF
REQNRWRDCNPWKESHRQLHHGVHVMKEPRQNFRAINYRCFDQIEQAQTFLEENEYREKL
IFLHSGVHEPIDTILINTDVQIIGASDSRDITSSVVLEGSRNTALTFTDGSANAYFGFIT
VRFRADPQCRQQQQQAQIAQQVPQMNHFYSILVTEKDAMPYIERCDITSKVGNGAAVCVK
KGAAPKVRTLNRRRFSKTVIFFSSNIALYWIARMLESTLLTMQLDTMNIVKLLETLWLES
GSRIMQIRISESVRSIPGKMLVYSHLSKLYFRNDKSQLVIFRHGQGYFEKCNIHSNRISG
IEVKNSANPVVVRCEVHHGYTGGIYVHERGRGQFMENRIYANAYAGIWITSHSDPTIRKN
EIFTGQQGGVYIFGEGRGLIEQNNIYGNALAGIQIRSQSDPIVRANKIHDGLHGGIYVHE
KGKGLIEENEVYGNTLAGIWVTTGSSPILRKNRIHSGKQVGVYFYDQGHGLLEDNDIFNH
LYSGVQIRTGSNPKITRNKIWGGQNGGVLVYNGGKGCLEDNEIFDNAMAGVWIKTDSEPT
LRRNKIYDGRDGGVCIFNRGKGLLEDNEIFRNAQAGVLISTESNPILRRNRVFDGKSAGI
EITNGATATLEENQLFRNKYGGLCVATGVNPVQKNNHIYDNHDTIGRALKSGQCLYKVSS
NNSFPMHNFFRCTTCNTTERNAICYNCIKHCHRGHSVELVRFDRFFCDCGAGTLERHCHL
QNVPRDNDTVYDSATPISTETGTEI
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcggaagaggcgcccgcagacaacgtgcttctgggttcacgaccaactctcgtt
tccacgagagccgcccatctttctccgaaactccagagaagaggatcgtcgtcagcccga
aaattcgcatctcggaattcgacgccagctaaccagcgtgtgacacgtcgcttaactcgt
agcagcgtttcaacgtcgtgcgtcgcttccgaaggctcgatgtcgtcgtcggtgggaccg
gaggagatgtcgtcgtcttcctcttcgccatacttccatccaccaacacctcaacaggtg
ttggatgattcttctcaacagtctcccagctattcacaggattccaattctcccgaacaa
cacactttcgagtcaatggaatcttctgaaggtggaacaccaagcagatattctccatct
ggaagatctgatatagacaatccaagtcttggattgtattctgcacaaggttcttatcca
tattccttacgaaaacgtcggccttgttgcacaaaagacgaggatttatgttttccgatt
gcagctgccacagctgatgagacacctcagcccacaatgaaaaagttcaaattggagtgc
ctttcacctggtgaagctagaaaagatttctcaattgatgatgaaataaaagtggagaac
gcacataccatagaagttatggatgatgaagatcaagaggattatatcaacactctccct
gacgaacttcttctaaaagtattctcatttcttcctgacaagtctcttcttgcttgtagt
tctgtctgctatcgtttcaaccaaatttcaaatagtcatgaagtatggaaggagctctat
ttgagtttatacgactatcgtattcctcttttccatccatctcatgccaaatttgaattc
cgggaacagaaccgttggagggattgtaatccatggaaggagtcacatcgacaacttcat
catggagtccacgtcatgaaggagcctcgtcagaacttccgcgccatcaattatcgttgt
ttcgatcagattgagcaggctcagacgtttttggaagagaacgaatacagagagaaattg
attttcttgcactctggagttcacgaaccaatcgacaccatccttatcaacactgatgta
cagattatcggagctagtgattcaagagatattacgtcttctgttgttcttgagggaagc
cgaaacactgccctcacgttcaccgatggaagtgcaaatgcatattttggattcatcaca
gtccggtttcgtgctgatccacagtgtcgtcaacagcagcaacaagcacaaattgctcaa
caagtacctcaaatgaatcatttttattcgattctggtaactgagaaagatgcgatgcca
tacatcgaaagatgtgatatcacttcaaaagttggaaacggtgctgcggtttgtgtcaaa
aagggtgctgctccaaaggtaaggactttaaatagaaggcgattttcaaagactgtgatt
tttttcagttcaaatattgcactgtattggattgcgagaatgttggaatctacattactg
acaatgcaactggacactatgaacattgtgaaattgctcgaaacactttggctggagtct
gggtcaagaatcatgcaaatccgtatttcagaaagtgtacgatccattccgggaaagatg
ttggtgtattcacatttgagtaagttatactttcgaaatgataaatctcaacttgtcatt
tttagacatggacaaggttattttgaaaaatgtaatatccattccaatcgaatatcgggt
atcgaggtgaaaaattcggcaaatccggttgtggttcggtgtgaagtgcatcacggatac
actggtggaatctatgttcacgaaagaggacgtggccagtttatggagaatcgtatctat
gcgaatgcgtatgctggaatctggataacttcgcattcggatccaacaatccgaaagaat
gagatattcactggacaacaaggcggagtttatatatttggagaaggacgaggactcatc
gaacagaataacatctatggaaatgcgttggctggaattcagattcgctcgcaatccgat
ccaattgttcgcgcgaacaagatccacgacggacttcatggtggaatttatgttcatgaa
aaaggaaagggattgattgaagagaatgaggtttatgggaatacactcgctggtatttgg
gtgacgactggatcaagtcctattctgagaaaaaatcggattcattctggaaaacaagtt
ggagtgtacttctacgatcaaggtcatggtcttctggaggacaatgatatcttcaaccat
ctttactctggtgttcaaattcgaaccggatccaatccgaaaatcacaaggaacaaaatt
tggggaggacagaatggaggtgtcttggtatacaatggaggaaaaggatgcttagaagac
aacgaaatcttcgataacgcaatggcaggtgtatggatcaaaactgacagtgagccgaca
cttcgaagaaacaagatttatgatggaagagacggcggagtatgtattttcaatcgtgga
aaaggtcttctcgaggataatgaaatcttccgaaatgcccaagcaggtgttctcatttcg
acggaatccaatccaattctacgaagaaatcgagttttcgatggaaaatcggccggaatt
gagatcacgaatggtgcaacagcaacactggaagaaaatcaattatttagaaataaatat
ggaggactttgcgtggctactggagtcaatcctgttcaaaagaataatcacatttacgac
aaccacgatacaattggacgagccttgaaatctggacaatgcctctacaaagtgagcagc
aacaacagttttccaatgcacaatttctttagatgcaccacgtgcaatacaaccgaacgt
aacgctatttgctacaactgcatcaaacattgccatcgtggccattcagtggagctggtg
agattcgatagattcttctgtgattgcggagccggaacactggagcgtcactgtcatctt
cagaatgtgccacgtgacaacgacaccgtctatgactcagcgaccccgatctctaccgag
acaggcacagaaatttaa
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integrated database retrieval system
