Caenorhabditis briggsae (nematode): CBG_19040
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Entry
CBG_19040 CDS
T01054
Symbol
Cbr-odc-1
Name
(RefSeq) Protein CBR-ODC-1
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr00330
Arginine and proline metabolism
cbr00480
Glutathione metabolism
cbr01100
Metabolic pathways
cbr04148
Efferocytosis
Module
cbr_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
CBG_19040 (Cbr-odc-1)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
CBG_19040 (Cbr-odc-1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
CBG_19040 (Cbr-odc-1)
Enzymes [BR:
cbr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
CBG_19040 (Cbr-odc-1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
DUF5448
AP_endonuc_2
Motif
Other DBs
NCBI-GeneID:
8579339
NCBI-ProteinID:
XP_002637344
WormBase:
CBG19040
UniProt:
A8XUM7
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Position
V:complement(12548755..12550129)
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AA seq
423 aa
AA seq
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MISQFELIGDDKVGVLPKQVNQLEMCREIAAQKDMQENDSSFMLVDLDKIIERFNLWKRE
LPMIEPFYAVKCNTDVVLIRVLASLGCGFDCASREEIDIVMETGVSADRLIYANPCKTRS
FIVHALERDVRMMTFDNAEELIKIGKLHPNAEMILRIAVSDPTATCPLNLKFGADPVLAA
PQLLKLAHEEGVNVVGISFHVGSGCNDATAYRTALSHAKNLCEIGEGYGFKMDIIDMGGG
FPGAEHAHNPFEKIAETIRDALDEFFPETDKRLIAEPGRFFAAEPFSLVANIIHATEVPA
SKITKDPKDSAEHGYMYYINEGVYGSFNCILFDHAHPIGGPLFDVDRNEKYMSTIWGPTC
DSLDLVEDKKLMVKMEIGEWMYYPDMGAYTLAAATTFNGFAKPVPMYVMSEEMWANIKDS
NHI
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgatttctcaattcgagctcatcggtgacgacaaggtcggcgtgctcccaaagcaagtc
aatcaacttgaaatgtgccgggaaattgctgctcaaaaggacatgcaagaaaacgactct
tctttcatgctggttgatctcgataagatcatcgaaagattcaacctttggaaaagagag
cttccaatgattgaaccattctacgcagtcaaatgcaacactgatgtcgttctcattcgt
gttcttgcttctttaggatgcggattcgactgcgcaagcagagaagaaatcgacatcgta
atggaaaccggagtctccgcggatcgtctgatctatgccaatccatgcaaaactcgcagc
ttcatcgtccacgctttggagcgagatgttcgtatgatgactttcgacaacgccgaagaa
ctcatcaaaatcggaaagctacatccaaatgctgaaatgatcctccgcatcgctgtttcc
gatccaacggccacttgcccactcaatctgaaattcggagctgacccagttcttgctgct
ccacagcttctcaaacttgctcacgaagaaggagtcaacgttgtcggtatttccttccac
gtcggatcgggatgcaatgatgcgactgcctaccgtactgcactgtcgcacgccaagaac
ttgtgtgagatcggagagggatatggattcaagatggacatcatcgacatgggaggtgga
ttcccaggagctgaacatgcacacaatccatttgagaagattgctgaaaccatccgtgac
gctctcgatgagtttttcccagagactgacaagcgtctgatcgccgaaccgggaagattc
ttcgcagctgaacccttctcgctagttgccaacattatccatgctactgaagttccagct
tccaagatcaccaaggatccaaaggacagtgccgagcatggatacatgtactacataaat
gaaggtgtctacggatcattcaactgcatcctcttcgaccacgctcatccgatcggaggc
ccactcttcgacgttgatcgcaacgagaagtacatgtctactatctggggaccaacttgc
gatagtcttgacctcgttgaagacaagaagttgatggtcaagatggaaatcggagaatgg
atgtattatccagacatgggagcatacaccctggcagctgctaccaccttcaacggattt
gccaagccagttccaatgtatgtgatgagcgaggagatgtgggcaaacatcaaggattcc
aatcacatctaa
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