Caenorhabditis briggsae (nematode): CBG_19501
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Entry
CBG_19501 CDS
T01054
Name
(RefSeq) Protein CBG19501
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
cbr
Caenorhabditis briggsae (nematode)
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cbr03000
]
CBG_19501
Transcription factors [BR:
cbr03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
CBG_19501
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
8588821
NCBI-ProteinID:
XP_002646822
WormBase:
CBG19501
UniProt:
A8XVR8
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Position
II:13042800..13044546
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AA seq
302 aa
AA seq
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MHHHISQDPSRSTTPEYQESPSQKTSDSTKKPPTLAFGMWRADNQKKFDEMYPNKLPFEV
VTKMKTAWRHHIPAEERDYYFAKERQLKIQRDNPSMAPTKVESPPRSFEVAREVESPKPQ
EEYVKRPLNPYMIFFRKRRADMSITEPNLPSSEICKRLGAAWANMSAAEKKPFYDEAGKL
KKQVYEEHPNYKFHPRKRPAAQISETPTSTMTPIRPTSYSIPHGPPSHSQPSSPMRQSSF
NMPPQQVQTPHTPSNVPPPGVPAQRQQVRFRFPPCLEYPRTSGRAIREGQENYGASYLPV
WF
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgcatcatcacatatcgcaagatcccagtcgatcgacaacaccggaataccaagaatcc
ccctctcaaaaaacctccgactccaccaaaaaaccaccaaccctggcatttggaatgtgg
cgtgcggataatcagaagaaattcgatgaaatgtatccgaataagcttccatttgaagtc
gtgacaaaaatgaaaaccgcttggagacaccacataccagctgaagagagagactactat
tttgccaaagaaagacaattgaagattcaaagagataatccatcaatggcgccaacgaaa
gtcgagagcccaccgcggagcttcgaagttgcacgagaagtggagagtccaaaaccacaa
gaagaatacgtgaaacgaccgctgaatccttatatgatcttctttcgaaaacgcagagcc
gatatgtcgattactgagccaaatcttccttcatcggaaatctgtaagcggttgggtgca
gcatgggcaaatatgtcagcggcggagaaaaaaccattctatgacgaagccgggaaattg
aagaagcaagtttatgaggagcacccaaactacaaattccatcctcgcaagcgaccggct
gctcaaatatcggagacccccacctcaacgatgactcccatcagacccacgtcttattcc
attcctcatggaccccccagccattctcaaccatcatccccaatgagacaaagttccttc
aacatgccaccacaacaagtgcaaactccacacacgccttctaacgtgccaccaccagga
gtccctgctcagcgccaacaagtccgtttccgttttccgccttgtctggagtatccaaga
acaagcgggagagcaattcgagaggggcaggaaaattatggagccagttatttgccagtc
tggttttga
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