Caenorhabditis briggsae (nematode): CBG_19513
Help
Entry
CBG_19513 CDS
T01054
Name
(RefSeq) Protein CBG19513
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
cbr
Caenorhabditis briggsae (nematode)
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cbr03000
]
CBG_19513
Transcription factors [BR:
cbr03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
CBG_19513
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
vATP-synt_E
Rabaptin
Motif
Other DBs
NCBI-GeneID:
8588830
NCBI-ProteinID:
XP_002646831
WormBase:
CBG19513
UniProt:
A8XVS7
A0AAE9DP92
LinkDB
All DBs
Position
II:complement(13005339..13007606)
Genome browser
AA seq
322 aa
AA seq
DB search
MRHMSNDRANTPDQHSESQEPPQKTKKQPLLAFGLWRADNQERYERIYPNRLPFEIVTKM
KNEWRHQTSAKIKESYYAKEQELRRQRENGSLQAEQHRIEVSRREAEVVQRVFGTAQREV
ESPKRDEYVKRPLNPFMIFCKNRRAELAISEPGLHCSEICKRLGAEWANMSADKKKPFYD
EAGKLKQQVNEEFHLHPNYKFHPRKRTATQMSEGTSSSFGLPDSQLSSPMRQRSFNMTSQ
PSTSSYASSNFHPPTPMPRDHSNMVPQPISAPRAPSTIPTNNAPRAQQDISISPRIEYPR
TSGRPIRRGQENYGVRDLPVWF
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcacatgtcaaatgatcgagcgaatacacctgaccaacactccgaatcccaagaa
ccgcctcaaaaaaccaaaaaacaaccacttctcgcatttggattgtggcgtgcggataat
caagagagatacgagagaatttatccgaatagacttccatttgaaattgtgacaaaaatg
aaaaatgagtggagacatcaaacgtcagctaagataaaagaatcatattatgccaaggag
caagaattgagaagacaaagagaaaatgggtctttgcaagcggagcaacatagaattgag
gtctctcgacgggaagccgaggttgttcaacgagtatttgggacggctcaacgagaagtg
gaaagtccaaaacgagatgaatatgtgaaacgcccgctgaatccttttatgattttctgc
aaaaatcgaagagccgagttggcgatcagtgagccgggacttcattgttcggaaatttgt
aagcggttgggtgcagaatgggcgaatatgtcagcggataagaagaagccgttctatgat
gaagctgggaaattgaagcagcaagttaatgaggaattccatctgcatccaaactacaaa
tttcatcctcgtaaaagaacggctactcaaatgtcggaaggcacgtcttcttcctttggg
ctccccgattctcaactatcatctccaatgcgacaacgctccttcaacatgacatcacaa
ccctccacgtcttcttacgcatcttccaacttccatccacccactccaatgcctcgggac
cactcaaatatggttccacagccaatttcagcccctagagctccctcgaccattccaact
aataatgctccacgagcacaacaggatataagtatttctccacgcatcgagtatcccaga
accagtggaagaccaattcgaagaggtcaggagaattatggagtcagagatttgccagtt
tggttttaa
DBGET
integrated database retrieval system
