Caenorhabditis briggsae (nematode): CBG_19616
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Entry
CBG_19616 CDS
T01054
Name
(RefSeq) Protein CBG19616
KO
K09578
peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [EC:
5.2.1.8
]
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
CBG_19616
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cbr03021
]
CBG_19616
03110 Chaperones and folding catalysts [BR:
cbr03110
]
CBG_19616
Enzymes [BR:
cbr01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
CBG_19616
Transcription machinery [BR:
cbr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
CBG_19616
Chaperones and folding catalysts [BR:
cbr03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Parvulin
CBG_19616
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rotamase
Rotamase_3
WW
WW_TCERG1
Rotamase_2
Glyco_hyd_101C
WW_2
Motif
Other DBs
NCBI-GeneID:
8588913
NCBI-ProteinID:
XP_002646914
WormBase:
CBG19616
UniProt:
A0AAE9DMT7
A8XW10
LinkDB
All DBs
Position
II:<12564572..>12566180
Genome browser
AA seq
161 aa
AA seq
DB search
MSDNSLPPGWEKRQSRTNDRVYYFNTATGQSQWERPEHTAFGKGSELTQVQCLHLLVKHE
GSRNPSSWRSDRITRSKEDAINILRNYEKELKDASDVQGKFRELAKQFSDCSSAKRGGDL
GPFKRRQMQKPFEDASFALEVGEMSDIVDTDSGVHLIYRIA
NT seq
486 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacaactcgctgccaccaggatgggagaagcgccagagtcgcaccaatgaccga
gtctactacttcaacacggctaccggtcaatcccaatgggaacgaccggagcatacggcg
ttcggaaaaggatccgagctgactcaagtccaatgtcttcatcttctggtgaagcacgaa
ggaagtcgtaatccatcgtcgtggcgttcggatcgtatcacacgatccaaggaggatgcg
atcaatattttgagaaactacgaaaaagagctcaaagacgcatcggatgtccagggaaag
ttccgtgaactcgccaagcagttcagcgattgcagctcagcgaagcgtggaggagatctt
ggaccattcaaacgccgacaaatgcaaaaaccattcgaagacgcgtcgttcgctctggag
gtcggagagatgtccgacatagtcgacaccgattctggagttcatctcatctaccgtatt
gcttaa
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