Caenorhabditis briggsae (nematode): CBG_19688
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Entry
CBG_19688 CDS
T01054
Symbol
Cbr-tag-182
Name
(RefSeq) Protein CBR-TAG-182
KO
K12236
transcriptional repressor NF-X1
Organism
cbr
Caenorhabditis briggsae (nematode)
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cbr03000
]
CBG_19688 (Cbr-tag-182)
04121 Ubiquitin system [BR:
cbr04121
]
CBG_19688 (Cbr-tag-182)
Transcription factors [BR:
cbr03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
CBG_19688 (Cbr-tag-182)
Ubiquitin system [BR:
cbr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
CBG_19688 (Cbr-tag-182)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
R3H
zf-NF-X1
Stm1_N
Motif
Other DBs
NCBI-GeneID:
8576695
NCBI-ProteinID:
XP_045096842
WormBase:
CBG19688
LinkDB
All DBs
Position
III:complement(3724645..3728199)
Genome browser
AA seq
1151 aa
AA seq
DB search
MADTIEASSNIATSSNPPRQGPKRGRGGRFRQAPREGGAEIAAGNQDAAPQMNPRGGRRG
FNGNRRGKAQKEGLDIDKFIVFQRKRFLGPSGRQPQPKPLHAFNPNAPVFNPSVPPPELP
ASTTEGPSNQKRQNPNPRRRGGQGGQQNEQRRQLEIQEGRQPNRNQSGPNRPDRREENRR
GAPGNYRRGQGARRREQKEEQLTEEETAMLADKPLRERLVYMLENNKYECAICYTRITTR
QGVWSCKTCYHIFHISTGCITDWAKSSRDKEAGSNTWRCPTCQTENETMPYNYYCFCGKQ
RNPNFRVGEVPHSCGEICGGTRKFGCPHPCNELCHPGPCSECKLYVTKSCNCGKTKKSVR
CGSGQSVLVRSSFLYDILIRILKFCFQCDTVCGKTLPCGQHTCEKICHSGECGDCTVVLE
QECFCGKKPKEVVCNPTACQKYSCGSECDGMFSCGVHRCTKKCHGKECGDCETGVNRIRT
CPCGRNSLQSLGIVREKCTDKVPTCDSICDKWLTCGTPGKNHRCREKCHEDQCPPCNLNT
SVVCRCGSSKGVILCEEYLEIMRTSEFWGGGFQWKTKRKFSAGEYLCTKRCRKKKSCGMH
KCQEVCCIQDEHYCLQMCNKRLSCGIHTCENVCHAGQCRPCLQASFDEQFCHCGHTVRMP
PIPCGARLPVCSQPCVRPHSCDHPVNHKCHGEPNCPPCTHLTDKTCYGGHTVRKNIPCHI
QSVSCGVICQKPLKCGVHVCQRTCHGDECEKEGEQCTKKCEAIRERCEHPCGLPCHKDSP
CEPSPCKTNVQITCECGRLKKAAPCCEVDKLIEAKQEKEETEKSGDSGDSGDQDKPGKLV
RSSSFSQLNCMKCDDDCKKLERNRKVAEALEVDTDEYGMNKLTPTISFPCYLKAMVRANI
DFVKNVEKVFIDLVIKVLSGEAYHDVFRAHLPPMSIEKRRFVHEYANFFNIVSESVDSPP
KRSIVLTAVRGKSHQPLILISDLVNYKGALKAPGPAVVRKDLMDQAMSKKEESEGTMKPL
RCTEKMVVRREARPMKEIAAPIPLKQQNQFALLGSDVDSDDEESKPTTSAAAGSSPPKDW
WNDEEEPGWQKVQQKEFVVEVERDMTEEEIEAAKLIEEGPTWEDQADEDSPGVSTAEAAT
PTEPSIVKNPE
NT seq
3456 nt
NT seq
+upstream
nt +downstream
nt
atggccgacactatagaagcttcatctaatattgcaacttcatctaatccccctcgacaa
ggaccaaaacgaggtcgaggaggacgtttccgacaagctccacgtgaaggaggagctgaa
atcgcagcaggtaatcaagatgctgcacctcagatgaacccgagaggaggacgtcgaggt
ttcaacggaaacaggcgcggaaaagctcaaaaagaaggtttggatattgataaatttata
gtttttcaacgaaaacgttttctagggccatctggaagacaaccacaaccaaagcctctt
catgcttttaatccaaatgcgccggtattcaatccatctgttccaccaccagaactccct
gcaagtaccactgaagggccttcgaatcagaaacgacaaaatccgaacccaagacgtcgt
ggtggacagggtggacagcaaaatgagcagcgtcgtcagctcgaaatacaagaaggtcga
cagccaaatagaaatcaatcaggaccaaatcggccggatagaagagaggagaatagaaga
ggagctcctggaaactacagaagaggacagggagctcgccgacgagaacagaaagaagag
cagcttacagaggaagagacagcgatgctggcagacaaacctctcagagagcgactcgtc
tatatgcttgaaaataataaatacgagtgtgcaatttgctacacaagaatcacgacgaga
caaggagtctggtcatgtaagacttgctatcacattttccatatttcaacgggatgtatc
acggattgggcgaaatctagcagagataaggaggcaggatccaacacatggagatgtcca
acttgtcagaccgagaacgagactatgccgtataactattactgtttctgtggcaaacag
aggaatccaaacttccgagtcggagaagtcccgcacagttgtggtgaaatatgtggagga
acccgaaaattcggatgccctcacccatgtaacgagttgtgtcacccgggaccatgcagc
gaatgcaagttgtatgtaacaaagtcttgtaattgtggcaaaaccaaaaagagtgtgagg
tgtggatccggacaaagtgttttggtacgttcttcatttctttatgatattttgattcga
attttaaaattttgttttcagtgcgacacagtttgcggaaagactcttccttgtggacag
cacacatgcgaaaaaatatgtcattctggagaatgcggcgattgtactgtggtccttgaa
caagaatgcttctgtggaaagaagccaaaagaagtggtttgcaacccgacggcttgtcaa
aaatactcttgtggctctgaatgcgatggaatgttctcgtgtggagtccatcgttgtacc
aaaaagtgccacggtaaggagtgtggtgattgtgagacgggagtcaacagaattcgaaca
tgtccatgtggacggaacagtcttcaatcccttggaattgttagagaaaaatgcacggac
aaagttccgacttgtgattcgatatgtgacaaatggctcacttgtggaactccggggaag
aatcatcggtgcagggagaaatgtcacgaagaccaatgtccgccatgtaacctgaatact
tctgtagtttgtcgctgcggatcttcgaaaggagttattctatgtgaagagtatttggag
atcatgagaactagtgagttttgggggggggggttccagtggaaaactaaacgtaaattt
tcagctggcgaatatctgtgcacgaaacgatgccggaagaagaaatcctgtggaatgcac
aaatgtcaagaagtctgttgcattcaggatgagcattactgccttcaaatgtgcaacaaa
cgactgtcctgtggaatacacacctgcgagaacgtttgtcatgccggacagtgtcgtcct
tgtcttcaagcaagcttcgacgaacagttctgtcactgtggacacactgttcgaatgcca
ccgattccctgtggagctcgtcttccagtatgctctcaaccgtgtgtccgaccacattct
tgcgatcatccagtcaatcataaatgccacggagaaccaaattgtcctccttgcacacat
ctaacggataaaacttgctatggagggcatacagttcgcaagaacataccatgccatatt
caatctgtatcctgcggagttatctgtcagaagccgttgaaatgtggtgttcacgtttgc
caaagaacctgccatggagacgaatgtgaaaaggaaggagaacaatgtacaaagaagtgt
gaagcgattcgagagcgttgtgaacatccatgtggtctaccatgtcataaagactcgcca
tgtgagccaagtccttgcaaaacgaacgttcaaattacttgcgaatgtggaaggctcaaa
aaagcagcaccatgttgcgaagtagacaaactgattgaagcgaaacaggagaaggaggaa
accgagaaatcaggagattctggagattctggagaccaggataagcctggaaaacttgtc
agatcatcaagcttctctcaactgaactgtatgaagtgtgacgacgattgcaagaagctg
gagagaaatcgaaaggtggctgaagctctagaagtcgataccgatgagtatggaatgaac
aaactgacgcctactatctctttcccttgctatctgaaagctatggttcgagcaaacata
gatttcgtcaaaaatgttgaaaaggtctttattgatcttgttatcaaagtgctaagcgga
gaagcttatcatgacgtcttccgtgcacacctcccccctatgagcattgaaaaacgtcgt
ttcgttcatgaatacgccaatttcttcaatatcgtctctgaaagtgtcgatagtccaccg
aaaagaagcattgtgctgacagcagtacgtggaaagtcacatcaaccactaattctcatc
agcgaccttgtcaactacaagggagctttgaaggctccaggtccagctgtggtccgtaag
gatttaatggatcaagccatgagcaagaaggaggaatcggaaggcacaatgaagccgttg
agatgtacggagaaaatggtggtgagaagagaagctcgtccgatgaaggaaattgctgca
ccaattccactgaagcaacagaaccagttcgctctactaggaagcgatgtggattctgat
gacgaagaatctaagccgacaactagtgctgctgctggaagttcgcctccaaaagactgg
tggaacgatgaggaagagccgggatggcaaaaagttcaacagaaggaatttgttgtggaa
gttgaacgagacatgactgaggaggaaatcgaagcggcgaagctgatagaagaaggacca
acttgggaagaccaggctgatgaggattctcctggagtttctactgcagaagcagctact
ccaactgaaccatcaatagtgaagaacccagaatag
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integrated database retrieval system