Caenorhabditis briggsae (nematode): CBG_19706
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Entry
CBG_19706 CDS
T01054
Symbol
Cbr-smp-1
Name
(RefSeq) Protein CBR-SMP-1
KO
K06842
semaphorin 6
Organism
cbr
Caenorhabditis briggsae (nematode)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
DUF6535
PSI_integrin
Motif
Other DBs
NCBI-GeneID:
8582643
NCBI-ProteinID:
XP_002640648
WormBase:
CBG19706
UniProt:
A0AAE9DXS0
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Position
I:complement(14624955..14637359)
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AA seq
714 aa
AA seq
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MRRNQILLLVVLLLAWSSEAVPSGVVNLRPKQNVNSVGIGDRFGGIGTSSDESDHFKLLA
ADGDSLLVGARNAVYNLSLSTLSVNHKIDWKPPAEHIEECIMKGKSKTDCQNYIRVLARK
SAGVSLVCGTHAFSPKCREYSVTDYGIRNTRQFDGQGISPYDPKHNSSALYIPQTNQLFA
ATVTDFVGNDALIYRKTIDETPATKASANIRTQSYDARVLNAPNFVATFAYKEHVYFWFR
EIASEAIDNNEESQIYARVARVCKNDKGGARPANERWTSYLKARLNCSLPSGSSPFYFNE
LKAVSDPIDAGNNDHVVYTVFSTPDSDVRMSAVCKFSMKKIREEFDNGTFKHQNNAQSMW
MAYNRNEVPKPRPGSCTPDSTKLPENTVSFILHHPLLHRPIPAVSAPLLVEGADRADLTQ
ITVLPRVKAVGGQNYDILFIGTSDGKVLKVVEVDGNATVIQAATVFQRGVPVVNLLTTKE
NVVIVSSDEIASLPVHNCVQQTSCSKCVQLQDPHCAWDSSIARCVHGGSWTGDQYIQNMV
FGQSEQCPEGIIVREVFDDSDSDGAQPEAVSRNVYAKEHSTITVILVAAVASLISLIIGA
FIGIRVNRWAATSEPHRSASSTSGSDYDSFGRARLTRHDSLTTATKVDHGFVPQSKQSMD
ATSLVMSMNATHHPMSMSQHGSGINTPSRDKNAIVTSINQNTLPRDYKVKKVYL
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcgaaaccagattcttttgctagtggttttgctcttggcgtggtcttcagaagcc
gtcccatctggtgtcgtgaatcttcgcccgaaacaaaatgtgaattctgttggcattggc
gatcgcttcggcggcatcggcacgagctccgacgaatccgatcacttcaaattgttggcc
gctgatggagattccctattagtgggagccagaaacgccgtctacaatctctcgctctcg
acgctttctgtgaatcataaaatcgactggaaacccccggcggagcacattgaagaatgt
ataatgaagggaaaatcgaaaacggactgtcagaactacattcgggtcctggcacgaaaa
tcagcgggcgtctccctggtctgcgggacgcacgccttctctccaaagtgtcgcgagtac
tcggtgacggattacggtatccggaatactcggcaattcgatggtcaaggaatctcgccg
tatgatccgaagcacaattccagtgcactctatattccacaaacgaatcagttgttcgca
gcgacggtgactgattttgtggggaatgatgcattgatttataggaagacaatcgacgaa
acaccggcaacaaaagcgtcagcgaacattcgaacgcaaagttacgatgcgagagtgttg
aatgctcccaacttcgtcgccacctttgcctacaaagagcacgtctacttttggttccga
gagatcgccagcgaggcaatcgataataatgaggagtcacagatctatgcccgtgtcgcc
agggtgtgcaagaacgataaagggggcgcccgtccggccaacgagcgatggaccagctat
ttgaaggcgcggctcaattgttcactgccttctggatcgtctccgttctattttaatgag
cttaaagccgtctcggaccccatcgacgctggaaacaacgatcacgtcgtctacacggtc
ttctccacgccggactctgacgtccgaatgagtgcggtgtgcaagttttcaatgaagaag
attcgagaggaattcgataatggcactttcaagcatcagaacaacgcccaatcaatgtgg
atggcctacaatcgaaacgaggttcccaagccccgccccggctcctgcaccccggactct
acgaaacttcccgagaatacagtatccttcatcctccaccaccccctcctccatcgtccc
atcccagcagtctccgcccctcttctagttgaaggcgccgatcgtgcggatcttactcag
attactgtattgccacgtgtcaaggcggttggcggtcagaactacgatatactgttcatt
ggaacatcagatgggaaggtgttgaaagtggttgaggtggatgggaatgctaccgtaatc
caagcggctacagtattccaaaggggtgttccagtggtgaatctactcacgacgaaggag
aatgtggtgatagtgtcatctgatgagattgcgtcgttgccagtacacaactgtgttcag
cagaccagttgctcaaagtgtgtgcagctacaggacccgcactgtgcgtgggattccagt
attgccagatgtgtacacggaggatcgtggaccggagatcagtacattcagaacatggta
ttcggccaatctgagcaatgtcccgagggaatcatcgtgcgggaagtgttcgatgacagt
gatagtgatggtgctcaaccggaagccgtgtctcgaaacgtttatgccaaggagcactcg
acaattacagtaatcctggtggcagcagtcgcttcgttgatttccctgattattggagcg
tttatcggaatccgtgtgaatcgatgggcggccacttccgaaccccataggtccgcaagc
tcgacaagcggctcggattacgatagtttcggtagagcgcgtttgacacgacacgattcg
ttgacgacggcgacgaaggtggatcatggtttcgtgccgcaatcaaagcagagcatggat
gccacgtcactggtgatgtcaatgaacgccacccaccatccgatgtctatgagccagcat
ggctccggaatcaacaccccatctcgggataagaacgccattgtcacctcaatcaatcag
aatacactgcccagagactataaagtcaaaaaagtctatctttag
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