Caenorhabditis briggsae (nematode): CBG_19759
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Entry
CBG_19759 CDS
T01054
Symbol
Cbr-sur-2
Name
(RefSeq) Protein CBR-SUR-2
KO
K15166
mediator of RNA polymerase II transcription subunit 23
Organism
cbr
Caenorhabditis briggsae (nematode)
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cbr03021
]
CBG_19759 (Cbr-sur-2)
Transcription machinery [BR:
cbr03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
CBG_19759 (Cbr-sur-2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med23
DNA_pol3_gamma_R_C
Motif
Other DBs
NCBI-GeneID:
8582689
NCBI-ProteinID:
XP_045096867
WormBase:
CBG19759
LinkDB
All DBs
Position
I:14946616..14962523
Genome browser
AA seq
1589 aa
AA seq
DB search
MTEKDKAPNPEDVIEMDDSFSPQFVQEVNRVKSQIKSLIENNTTLRFFKPLTSNLGDVTA
ILRISFNNMMSKMEEKEKQSLVKELIKLVHHVAEKNTQDKVFIAASYERVVDELLRYANQ
KEVISTTLCVEGLIMTSDFRMCSRIDQEKWKFIKECIPKIDYKGIRTIIRYILESQLRRL
PYQLSPEKVNELRRVEDVLLKIVDRDLNLMPPLITLSEVMRGTPKQAHMFPRLTEKLANL
SSHFRPIADLTHVCGRPFIYPIPFHPAFHPPTSYWEDFGMNAQSPYTQSHHMLPYRPQHK
AASCLYTFYMILRQPLGKDSLNPTNRNKTKSHWEPLLSVMIVEAMAETEALPEGKQIPRY
QWDNITNLVMYGMSHLLVNPKNFFHYLKGLINQCKYTRARDEVMWIVFQVVSSLHKMIKI
EDAVQEIVDLYNELFDGEFSWHGASDHPARMARFLAAASTWMLLEKNKAHKQNTDTIKSH
IKVIHEAALNFDPKNMGMLAVLANAFKSDTRIGAQIVPAMSEALNTPPDPSQPTFDLSYQ
RKAVNQFDAFPKEFLDALTSRAKRSLLGQILSVFRSFGTDKLPSPAAFETLARICQSEDY
EMAVKDLESLASRSLHISTQERAADIATNNQAKDQCHFLFDFLAYRLPHVHSYGKYTSTT
GSLLLYFTASVAPNTPQNHQVYRLLEQALLRRMYWRTFHESVINHSQLFGSSYKENSNNV
MLRHLKNPKTFSTPVDQWQFPLNPEIFKMTIYAFMRALKITGQEIPLDGTMHPIHVAGYG
WPEKSTTFFPKWALEEIKKTDVKKLAPNYAEILSTTDEAFRMNTLLTGGQYVIRYADDPN
PITYHCMLAVIFKQLCSKPEQDLTSEYYQVMEKKSPKDIVVMGNYLVDFIIADVKNNQDC
NEQTFKTIAKTAALMCFHFNIHRADRFLLSLIMHPSTDEDAQICIQIANEFLLTPKFQER
IKWFYENDVPRKEKDPYEYIKAIVKYHDAFPEFEACQLVPKNDDTGTNVHMPTYYGCLIE
RLLPILDQYVYVALEQQGYKMSNALLQLVSMFYRYHPMPIHFMYSVLFVSHGKMAGPDAK
SFVSAFASQIEECHLTEEFEKYNHQKSSCEELIMELLDRMAASLDFVLTPPTFVAKDWRT
AEMSPGAQALYLACIELMASPHSPEKLVNAMINVMQMRPHLRPFNVFNLIALLLTALPST
YADALHEEFIGVFKNGETANLKFEEIVFDNYDSSLLLHLPNRARSINMIAQIYWTQCNMA
LLNPFANDQVPKLLEHVKTEKDLWYTLRLVMPIIRRFWDSWDFAKTMRALRERFGPLVIM
KLIIEKLGSMAESGVEIVHEAPFCDLFYNCKYVFVGDFLRETAITEFAKLPEAMRERLKY
YVSQNEPAPPETPEREKTPERKDQQKEQQEQQHQQHHQNPQLHHEAQHHPHHPHQQPSMP
PPQLIPQHHLQHHQQQLHHQQQQQQHLSQMMPPPQQPLQHLPHHQMDMAPPTPAPMHHQQ
HQMAMHQQMYPGQMFHHPQGGHMGYGMQHHMQQPHPHHPQMQGQMPSQMQHMVRMHNMTP
QQQQQYAYMMQQQQHHYMQQQQHQQHHHM
NT seq
4770 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaaaagacaaagcccccaatccagaagacgtcatagagatggatgacagcttt
tcgccgcaattcgttcaagaagtgaatcgagtgaagtcccagatcaaaagtctcattgag
aacaacaccacccttcgatttttcaaacccctaacttcgaatctaggagatgttacagcg
attttgaggatttcctttaataatatgatgtccaaaatggaggaaaaagagaagcaatct
ctagtgaaagaattgatcaaacttgtgcatcatgtggctgaaaagaatacacaggataaa
gttttcattgccgcaagttacgagagagtggtagacgagcttcttcgatatgccaatcaa
aaagaggtgatctcaacgactctatgtgtagaaggactcattatgacatcggattttcga
atgtgtagtaggatagatcaggagaaatggaagttcataaaagaatgcattcccaaaatt
gactacaaaggaatcagaactatcatccgatatattttggaatcacaactcagacgactt
ccttatcagttgtcaccagagaaagtgaatgaattgcgacgtgtggaagacgttttgctg
aaaattgtggatcgagatttgaatttgatgcctccattgataacgttatcagaagttatg
agagggacaccgaagcaagcacatatgtttccgcgcctcaccgagaagctcgccaacctc
tcctctcacttccgtccaatcgccgacctaacccacgtatgcggccgcccattcatctac
ccaatccccttccatccagccttccatcctccaacatcatattgggaagatttcggaatg
aatgcacagagcccatatacccagtcccatcatatgctaccgtatagacctcagcataag
gcggccagttgtctctacacattttatatgatcctaagacagccattgggaaaggattcg
ttaaacccaacaaatcgaaataaaaccaaatcgcattgggagcccttgctgtccgtgatg
attgtcgaagccatggcagagaccgaagcacttccagaaggcaaacagattccacgttat
caatgggacaacatcacgaatcttgtcatgtatggaatgtctcatcttttggttaatccc
aaaaacttcttccactatctcaaaggtcttatcaatcagtgcaaatacacccgtgctcga
gatgaagtcatgtggatcgtattccaagtcgtcagctctctacacaaaatgatcaaaatc
gaagatgctgttcaagagattgtcgatctctacaatgagctattcgatggagagttcagt
tggcacggcgcctcagatcatccagcacgaatggccagattcctggcagccgccagtaca
tggatgttgttggaaaaaaacaaagcccacaaacaaaacaccgacacaatcaaatcgcac
atcaaagtgatccacgaggcggcgctgaatttcgatccgaagaatatgggaatgttggca
gtgctagcgaatgccttcaaaagcgacactcgtattggagctcaaatcgtaccggccatg
tcggaagcactgaacacaccaccagatccatcccaacccacattcgatctatcgtaccaa
agaaaagcagtgaatcagtttgatgcgtttcctaaggaattcctagatgcactgacttct
cgagctaagcgatcgctgctgggacagatattgagtgttttccgtagttttggaactgat
aagcttccaagtcccgctgcatttgagacattggcaaggatatgtcaatcggaagattat
gagatggctgtcaaggatttggagagtctagctagtcgatcgttgcacatttctactcag
gaaagagcagcggatattgcaacgaacaatcaagccaaggatcaatgtcacttccttttc
gatttcctcgcctaccgtctaccccacgtgcattcctatggaaagtacacctcaaccact
ggatctctcctcctttatttcacagcatctgttgctccaaacacacctcaaaaccatcaa
gtctatcgtcttctggagcaagcacttcttcgtagaatgtactggagaacgttccatgaa
tcagtcatcaatcactctcaactattcggttctagctataaggagaactcgaataatgtg
atgctacgtcatctgaagaatcccaagacgttctcgacaccagttgatcagtggcaattt
ccattgaatcctgagatcttcaaaatgacgatttatgcatttatgagagctttgaagatt
actggacaggaaatcccattggatggaactatgcacccaatccacgtggctggctacgga
tggcctgaaaagtctacaacgttcttcccaaaatgggctttagaagagataaagaagaca
gatgtcaaaaaattggccccaaattatgcagagattctttcgacgactgatgaggcattc
cggatgaatacattgctcactggaggtcaatatgtgattagatatgctgatgatcctaat
cccatcacttatcactgtatgctggcggtcattttcaagcagttatgttcgaaacctgag
caggatttgacttccgaatattatcaggtaatggagaaaaagtcgccaaaggacattgtt
gtaatgggcaactatctggtggatttcataatagctgatgtgaagaataatcaagattgt
aatgaacaaactttcaagacgatcgccaaaaccgccgcattgatgtgcttccatttcaac
attcaccgagccgaccgttttcttctctcacttataatgcatccatcaacagacgaggac
gctcagatttgcattcaaatcgccaacgagttcctgttgactccaaaattccaagaacgc
atcaaatggttttatgagaatgacgtgccaagaaaagaaaaagatccctatgagtacatt
aaagcgattgttaagtaccatgacgctttcccggagtttgaagcttgccaattggttcca
aaaaatgatgacactggtacaaatgttcatatgccaacttattacggttgtcttatcgaa
cgcctcctcccgattctggatcaatacgtctacgtggctttggagcaacaaggatacaag
atgagcaatgctcttctccaattagtctcaatgttctatagataccatccgatgcctatc
catttcatgtattctgtgttattcgtgtcccatggaaaaatggctgggcctgatgccaag
tcattcgtttctgcattcgcatctcaaatcgaagagtgtcatttgacagaggaatttgag
aagtataaccatcaaaagtcgtcgtgtgaagagttgataatggagttgttggatcggatg
gctgctagtttggatttcgttttgactccgcccacttttgtagcgaaggattggaggaca
gctgagatgagtcctggagcacaggcgttgtatctagcttgtattgagctgatggccagt
ccccattccccagagaaactagtcaacgccatgatcaacgtaatgcaaatgcgtccacac
cttcgaccattcaacgtcttcaacctcattgctcttctgttgactgcacttccatctacc
tatgctgatgctcttcacgaggaatttattggagttttcaagaatggagaaaccgcgaat
ctcaagtttgaggagatcgttttcgataactatgattcctcattgctgctacatttaccg
aatcgagcgagatcgatcaatatgattgctcagatctattggacgcagtgcaatatggct
cttctcaacccattcgctaatgatcaagttccgaaacttctggaacacgtcaaaaccgaa
aaggatctctggtacacccttcgtctcgtaatgcccatcatccgtcgtttttgggattcc
tgggacttcgcaaaaaccatgagggccctccgagagagattcggtcctcttgttatcatg
aagctaatcattgaaaagctaggatccatggctgaatctggagtggagatagttcatgaa
gcaccgttctgtgatctattctacaattgcaaatacgttttcgttggcgatttcttaagg
gaaactgcgatcacggaattcgcgaaacttccagaagcaatgagggaacggttgaagtat
tacgtgtcacagaatgaaccagcacctccagaaacaccggagagggagaagacgccggag
aggaaagatcagcagaaggagcaacaggaacaacaacatcagcaacaccatcagaatccc
caacttcaccacgaagctcaacatcatccccaccatcctcaccagcagccatccatgcca
ccacctcaactaatcccccaacatcatctacaacatcatcaacagcaacttcatcaccaa
caacaacaacaacagcatctatcccaaatgatgcccccacctcaacaacctcttcaacac
ctcccccatcatcaaatggatatggctccgcccacacctgctccgatgcaccatcagcag
catcagatggcaatgcatcagcaaatgtatccgggtcaaatgttccaccatccccaaggt
ggtcatatgggttacggtatgcagcatcacatgcaacaaccgcatccacatcatccgcag
atgcaagggcagatgccgtcacaaatgcagcatatggtaaggatgcacaacatgacgccc
cagcagcaacaacagtacgcctacatgatgcaacaacagcaacaccactatatgcaacag
caacaacaccaacaacatcatcatatgtaa
DBGET
integrated database retrieval system
