KEGG   Caenorhabditis briggsae (nematode): CBG_19782
Entry
CBG_19782         CDS       T01054                                 
Symbol
Cbr-vps-28
Name
(RefSeq) Protein CBR-VPS-28
  KO
K12184  ESCRT-I complex subunit VPS28
Organism
cbr  Caenorhabditis briggsae (nematode)
Pathway
cbr04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:cbr00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    CBG_19782 (Cbr-vps-28)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cbr04131]
    CBG_19782 (Cbr-vps-28)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cbr04147]
    CBG_19782 (Cbr-vps-28)
Membrane trafficking [BR:cbr04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-I complex
    CBG_19782 (Cbr-vps-28)
Exosome [BR:cbr04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   CBG_19782 (Cbr-vps-28)
  Exosomal proteins of other body fluids (saliva and urine)
   CBG_19782 (Cbr-vps-28)
  Exosomal proteins of colorectal cancer cells
   CBG_19782 (Cbr-vps-28)
  Exosomal proteins of bladder cancer cells
   CBG_19782 (Cbr-vps-28)
SSDB
Motif
Pfam: VPS28 GrpE CENP-Q
Other DBs
NCBI-GeneID: 8582710
NCBI-ProteinID: XP_002640715
WormBase: CBG19782
UniProt: A8XWB7
LinkDB
Position
I:15045931..15047850
AA seq 209 aa
MSQNSNLMREVRLFENHSEREQMENLSELFAVLNALEHLEKMFSRDHVTADEYKTECFKL
IDQYKVTMRLVHGATSIEEFAKKYRLHCPAAIERIREGRPITVKDDQGNVLKHIASIVEQ
FITFLDSLRLNTRAVDDLYPVLDDLYNAINSTSRVPIDANVTTKVKKWHDRLSSMAATDE
ISDDEARQMIFDTEGAYQSFQKALNEQKH
NT seq 630 nt   +upstreamnt  +downstreamnt
atgtcccaaaattcgaatctgatgcgcgaagtgcgcctatttgagaaccattcggagcga
gagcaaatggagaatttatcggagctttttgcagttctaaacgctttggagcacttggag
aagatgttcagtagagatcatgtgacagctgacgagtacaaaaccgaatgtttcaaacta
atcgatcaatacaaagtgacgatgcgtttggtgcatggagcaacgagcatcgaggaattc
gccaagaaatatcgattacattgtccggcggcgattgagagaattcgagaaggacggccg
attacggtgaaggatgatcagggcaatgttctcaaacatattgcttctattgttgagcaa
ttcatcacattcctggactctctccgtctgaatactcgtgccgttgatgatttgtatcca
gttctggatgatctctacaacgcaatcaattccacatctcgtgttccaatcgatgcgaat
gtcactacaaaagtcaaaaaatggcacgatcgtctgtcttcgatggccgccactgatgag
atttccgatgacgaggctcgtcaaatgattttcgacaccgaaggcgcttatcagtcattc
cagaaggcgctcaacgaacagaaacattaa

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