Caenorhabditis briggsae (nematode): CBG_19783
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Entry
CBG_19783 CDS
T01054
Name
(RefSeq) Protein CBG19783
KO
K01866
tyrosyl-tRNA synthetase [EC:
6.1.1.1
]
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CBG_19783
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cbr01007
]
CBG_19783
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cbr03016
]
CBG_19783
03029 Mitochondrial biogenesis [BR:
cbr03029
]
CBG_19783
Enzymes [BR:
cbr01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.1 tyrosine---tRNA ligase
CBG_19783
Amino acid related enzymes [BR:
cbr01007
]
Aminoacyl-tRNA synthetase
Class I (A)
CBG_19783
Transfer RNA biogenesis [BR:
cbr03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
CBG_19783
Prokaryotic type
CBG_19783
Mitochondrial biogenesis [BR:
cbr03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
CBG_19783
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA-synt_1b
tRNA-synt_1
tRNA-synt_1e
Anticodon_1
Anticodon_3
tRNA-synt_1f
Motif
Other DBs
NCBI-GeneID:
8582712
NCBI-ProteinID:
XP_045096859
WormBase:
CBG19783
LinkDB
All DBs
Position
I:complement(15048701..15060395)
Genome browser
AA seq
1232 aa
AA seq
DB search
MFQSRFFIRHSSTYVTSPIFYANAEPHIGHAYTAVLCDTAHRWNQLKNFKDKESKALFSI
GTDEHGSKIFQASQLAGTTPKQFCDQVSSKFSTLFDTLNISHTNFIRTTDPKHAESVQHF
WRVLQDRGHIYKSSYSGYYSISEECFIPENEVEENAENKMVLKTTGTAVEWIEEENYMFR
LSEFREKVGEWIEKTDVVWPVKYKSLALDSLTLDGDLSISRARKRLSWGISVPDDPSQTI
YVWLDALVNYLTVSGYPKDRLVWPPTCQVIGKDITKFHLYYWPAFLMAADLPLPQRVFVH
GHWLVDNVKMSKSLGNVVNPKHAIDKFTSEGLRYFLLKQGNPSNDCSFSWNSCLETVNSD
LVNNVGNLLNRSTVEKINKSGTYPRRVELEKKVKEDTEKLLEMLEESREKCEELYDDMYY
YKGIEQLMLTMKEANRVFQLSQPWKETDSERLESLLFVTYETIRIVSILLQPITPKMANF
CLDRLGVDQRNLESAKFGSYASGGKLGVDQGVFIGQLEIMATPTAEEITEETKQRRELIL
RNLQESLGVDKLTLQLGTPGKVPHVYWGTATTGKPHVGYLVPMRKIADFLQAGLKVTILF
ADLHAYLDNMKSTWDVLKSRVVYYQKVIIALLESLDVPIGQLHFKKGTEYQLERDYTDHV
LQLTAQVSLRDALKAGAEVVKQVESPLLSGLLYPLLQALDEQYLKVDGQFGGVDQRKIFI
LAEEQLPKLKLGKRWHLMNPMVPGLTGTKMSSSEEDSKIDVLDESDRIRSKIMGAACSRD
QPDNGVLAFYNYVLFPIVSPNAIEISNQQFFDFNALKQAYLDGKLDESALKTFLSDFLVN
LLDKVRAKCDTDEVKEAKEKGYSKVVEAESTPIPEEPIPVLSAEQKAWKERIQNGGELFS
EDELVRVLSSVSPSNPLHVMFVAHGKGKFHLGFVSPLLRIKALVDAGVPVKATILVSDLE
AYLDNQKVSWGAIEARGIYYRETFLSLIKNLKLEDVVEVKVAAEHEKYFNKDYVLDFYKM
ASAVTRDETTICEGTALSGNLVPLIYSLNAHIYRPDLLIIGNDSTVFADLSSRLLKCFGY
SAIAHLAIPTVPGCNGQKMSCSVPDFLLDPLDTPKQTKTKIARSFCEPQNLEGNVAMQLA
DQIVFPLLNGSSLSIPRSSDNGGDVAVSSYKELEHEFITGSNPEFPLHPGDLKNAVVGVI
NGLFDGVRADFSGKEREKLVKDAFTVSKGKKK
NT seq
3699 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaatctcgatttttcatcagacactccagcacatatgtcacatctcctattttt
tatgcaaatgctgaacctcacatcgggcacgcctacacagcagtgttgtgtgacactgct
catcgatggaatcagttgaagaatttcaaggataaagaatcgaaagcattgttttcaata
ggaaccgatgagcatgggagtaagattttccaagcctcacagctcgccggaacaacaccc
aagcagttttgcgatcaagtatcttcaaaattctccactcttttcgacacactaaacatc
tcgcacacaaacttcatcagaactactgacccaaagcatgcagaatctgtgcagcacttc
tggagggtacttcaagacagaggacacatctacaaaagcagttattctggatattatagc
atttctgaggaatgcttcattcctgagaatgaggtggaggagaatgcggaaaacaagatg
gttctgaagacaacaggcaccgctgtggaatggattgaagaggagaattatatgtttcgg
ctgtcggaattccgagaaaaagtgggcgaatggattgagaagacggacgttgtgtggcct
gtcaagtacaaatcgctggctctggatagtttgacgttggacggcgatttgtcgatttca
agggcgagaaagcggctgtcttggggcatttcggtacccgacgatccctcgcagacaatt
tacgtatggctggatgccttggtgaattatttaactgtctcgggatacccaaaagataga
cttgtatggccaccaacctgccaggttattggcaaggatatcacaaaattccatctctac
tactggcctgcattcctgatggccgctgatctacccctcccccagcgagtattcgttcat
ggtcattggctagtggacaatgtaaaaatgtcaaaaagcctgggaaacgttgtgaatcca
aaacacgcaatcgataaattcacttctgaaggtctccgatactttctcctaaaacaagga
aacccaagcaatgattgcagtttcagttggaatagttgtctagaaaccgttaatagtgat
ttggtgaataatgtaggcaatttgctgaatagaagtactgtagagaagataaataagagt
gggacatatcctagaagagtggaattggagaaaaaggtgaaagaagacaccgaaaagctc
ctggagatgctagaagagagcagagagaaatgtgaggagctctacgatgatatgtactac
tacaaaggcatcgagcagttgatgctgacgatgaaggaggcgaatcgagtgttccaattg
agtcaaccatggaaagagacggattcggagagacttgagagtctcctttttgtgacttat
gagacaattcgaattgtttcgattcttcttcaacccatcactccaaaaatggcgaatttc
tgtttagatcgactaggagtagatcaaaggaatttggagagcgcgaagttcggaagttat
gcgagtggcgggaaactgggtgtagatcaaggagtcttcattggccaactggaaattatg
gcaacaccgacggcggaagaaatcaccgaggagacgaagcagcggcgcgagctgatcctt
agaaatttgcaggaatcgctcggagtcgacaagctcacgctccaactaggaacccctgga
aaagtgccacatgtctattggggaacagcaacgactggcaaaccacatgtcggatatctg
gttccaatgcgaaaaatcgcggacttccttcaagccggactgaaagtgaccatcctgttc
gcagatcttcatgcctatctcgacaatatgaagagtacttgggatgtgttgaagagtcga
gttgtctactaccagaaggtcatcattgcgttgttggagtcattggatgttcctattgga
cagttgcacttcaagaaaggaacggaataccaattggagagagactacacggatcatgta
ctccaattgacggcccaagtttcccttcgcgatgctctgaaagctggtgccgaggtagtc
aagcaagtggagtcgccacttctctcaggtcttctctaccctcttcttcaagctctcgat
gagcaatatctcaaagttgacggccaattcggaggagtggatcaacggaaaatcttcatt
cttgccgaggaacaactcccgaaattgaagcttggaaagcgttggcacttgatgaatccg
atggtgccaggacttactggaaccaaaatgagcagttctgaagaagactcgaagattgat
gtgttggatgagtcggatagaattcgtagcaaaatcatgggtgccgcttgctcgagagat
caaccggacaatggagttctcgctttctacaactatgtactcttccccattgtgtcgccc
aacgcgattgaaatttccaaccaacaatttttcgatttcaatgctttgaagcaagcgtat
ttggatggaaaactcgatgagtcggctttgaagacgttcctatctgatttcctagtgaat
cttctggacaaagtcagagcgaaatgcgacactgatgaggtcaaagaagccaaagaaaag
ggatacagtaaagttgtggaagcagagagtactccgattccagaagaaccgattccagtg
ttgagtgcggagcagaaggcgtggaaagaacggattcaaaatggaggagagctgttcagt
gaggatgagctggttcgagttttgtccagtgtctctccttcaaaccctctccacgtgatg
ttcgttgctcatggaaaaggaaagttccatcttggattcgtgtcaccgcttctcagaatc
aaagcacttgttgatgcaggagttcctgtgaaagcaacgattcttgtctcggatctggaa
gcttatttggacaatcagaaggtgtcatggggagcgattgaagcgagaggaatctactat
cgagagactttcctgtcacttatcaagaatttgaaattggaggatgtcgtggaggttaag
gtggcagctgaacatgagaagtactttaataaggactacgtactcgatttctataaaatg
gcatctgctgtgacacgagatgagacaacgatctgcgagggaactgctctatccggaaat
ctggttcctctcatctactcactcaatgcacatatctatcgtccggacttattgataatc
ggaaacgattctacagtattcgctgacctatcatcccgtcttctgaaatgctttggatac
tcagcgattgctcatcttgcaattccaactgttccaggatgcaacggacagaaaatgagc
tgctcggtgccagatttccttctagacccattggatacaccgaagcaaaccaaaacgaaa
atcgcgagaagcttctgcgaacctcagaacctggagggtaacgtggcgatgcagcttgcc
gatcagatagtcttcccattgctcaacggatcctctttgagtattccacgatcttcggat
aatggtggtgacgtggcagtctctagctacaaagagttggagcatgagttcataactggc
tccaatccagagttccctcttcatccaggagatttgaagaatgccgtcgtaggagttatc
aatggactattcgacggagtccgcgcagatttcagtggtaaggaacgcgagaagttggtg
aaggacgcgtttacagtgtcgaaggggaagaagaagtaa
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integrated database retrieval system
