Caenorhabditis briggsae (nematode): CBG_19850
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Entry
CBG_19850 CDS
T01054
Symbol
Cbr-egal-1
Name
(RefSeq) Protein CBR-EGAL-1
KO
K18740
exonuclease 3'-5' domain-containing protein 1
Organism
cbr
Caenorhabditis briggsae (nematode)
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbr03019
]
CBG_19850 (Cbr-egal-1)
Messenger RNA biogenesis [BR:
cbr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
CBG_19850 (Cbr-egal-1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
WH_Egal
DNA_pol_A_exo1
DNA_polI_exo1
DUF7677
Motif
Other DBs
NCBI-GeneID:
8575816
NCBI-ProteinID:
XP_045096902
WormBase:
CBG19850
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Position
IV:6358522..6361657
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AA seq
578 aa
AA seq
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MEEAKNMALLFFMDHLMQKNGRRTIHDLSCQFGARGFSEEMRNAVGTTQEGLTEFLQGHP
SLFTVEGDQVILNGHNDLNAKNNPLLQSGVRSRNYEKEAVDFFVTKLTKFGPELQIKSLL
GHRSQAAPEVRLVSGRHLKEFCEFLSSQVDYFVVEADRVRLKNMPEPDENAIEMDDEGRP
LAGVKAKQAAVEYLKSVLEQNEDQPIPLDLFYQNFCQRFSHTIRQDVATNPKELLQFLKL
NRGLFFIRSNKVSLVKNRPNEEGSENGSDEGDETNNNGMFPLDQSALTRIHFVKALKPAQ
DLIARLWQDINNMEKKVVGLDLKTVTVGVDGEIFLSLGVIATTSQIGIFDLASSDVIILE
SGFKGILESEKVVKVIHDARRVASLLAHKYAVHMRNVFDTQVAHSLLQHDKFGKPVHEMR
PITFINLQRVYYPQSLMLSDVTPRKMSQSPNLIFSWGVRPITEEFQLTIVEEAHCLLSAL
YQALSNLIPVHLRGLFEDKCIEVNHPEVLLASPNRPPPQPFISSPYRASTRRDARNGGTI
MQSFSPAPYAAAPRPQMSDACTQTFSTGDIEVLNVFYE
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggcaaaaaatatggcgttgttgttcttcatggaccatctaatgcagaaaaat
ggacggagaacaatccatgatttgagttgtcaattcggagcacgcgggtttagtgaggag
atgagaaatgctgttggaacgactcaagaaggattgaccgagtttttgcagggtcaccca
tcactcttcactgtggaaggagaccaagtaatcctaaacggtcacaacgatctgaatgcc
aagaacaatccactcctgcaatccggcgtccgtagtcgtaactacgagaaggaagccgtc
gatttcttcgtcaccaaactcaccaaattcggcccagaactacaaatcaaatctctattg
ggacatcgttctcaagctgctccagaagttcgtctagtctcgggacgtcatctgaaagag
ttctgcgagtttttatcatctcaagttgactattttgtggtcgaagctgatcgagtccgc
ctgaagaatatgccggagccggatgagaatgcaatcgagatggacgatgaaggaagacca
ttagctggagtgaaggcgaaacaagcagccgtggaatatctgaaatcggtgctggaacaa
aatgaagatcagccaattccattggatctattctatcaaaatttttgtcaacgattctct
cataccattcgccaggacgtcgcaactaatccaaaagaactccttcaattccttaaactc
aatcgaggactctttttcattagatccaataaggtatctcttgtgaagaaccgtccaaat
gaagaaggatcggaaaatggatcagatgaaggagatgagaccaataacaatggaatgttc
cctcttgatcaaagtgctctgactcggatccattttgtgaaggctttgaaaccagctcaa
gatctgatcgcaagactctggcaggatataaacaatatggaaaagaaggtggttggtctg
gatttgaagactgttactgttggagtcgatggagagatcttcctgtcgttaggagtcatc
gccaccacctcacaaatcggaattttcgacttggcttccagtgacgtcatcattttggag
tcaggattcaaggggatactggagagtgaaaaagtggtcaaagtgattcatgacgcaaga
cgagtcgcctcgcttttggcacacaaatacgcagttcacatgagaaatgtattcgataca
caggtcgctcactctcttctccaacatgacaagttcgggaagccagtccacgagatgcgt
ccaatcacttttataaacttgcaacgtgtctactatccgcaatcactgatgctcagcgat
gtgactcccagaaaaatgagtcaaagtccaaacttgattttcagctggggcgtccgacca
atcaccgaagagttccaattgacgattgtcgaggaagctcattgtcttctttctgctctt
tatcaagcactttccaatttgattccggtgcatttacgtggtcttttcgaagacaaatgc
atcgaggtaaaccatccggaggtcctcctcgcctctccaaaccgtcctccaccccaacca
ttcatctcatctccatatcgtgcctcaactcgccgtgacgccagaaacggcggaaccatt
atgcaatcattttctccagctccatacgccgctgctccgcgtcctcaaatgtcggacgca
tgcactcaaacattctcgacgggcgacatcgaagtgctcaatgttttctacgagtaa
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