Caenorhabditis briggsae (nematode): CBG_19995
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Entry
CBG_19995 CDS
T01054
Symbol
Cbr-soc-2
Name
(RefSeq) Protein CBR-SOC-2
KO
K19613
leucine-rich repeat protein SHOC2
Organism
cbr
Caenorhabditis briggsae (nematode)
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_14
LRR_4
LRR_1
LRR_LRWD1
LRR_9
LRR_Zer-1
DUF1118
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
8575921
NCBI-ProteinID:
XP_002633925
WormBase:
CBG19995
UniProt:
A8XWW4
A0AAE9ESX8
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Position
IV:5616381..5620646
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AA seq
559 aa
AA seq
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METSKEFEFRPAKETSRSKSPGGIVGRLSNFARNKARHSLSEKGSNSVGGSGGSGFDKPR
KDLLKEFHKCKEAQDQRLDLSSIEITSIPSPIKELTQLTELFLYKNKLTCLPTEIGQLVN
LKKLGLSENALSSLPDSLSSLESLETLDLRHNKLTEVPAVIYKITSLETLWLRYNRIVAV
DEQIGNLQKLKMLDVRENKIRELPSAIGKLSSLVVCLVSYNHLTRVPEEIGECHALTQLD
LQHNDLSELPYSIGKLTNLVRIGIRYNKIRCIPSELESCQQLEEFIVESNHLQLLPPNLL
TMLPKIHTVNLSRNELTAFPAGGPQQFVPTVTINMEHNQISKIPIGIFSKATRLTKLNLK
ENELVSLPLDMGSWTSITELNLSTNQLKVLPEDIEKLVNLEILVLSNNQLKKLPNQIGNL
KKLRELDLEENELETVPTEIGFLQHLTKLWVQSNKIVTLPRSIGNLCSLQDLRLGENNLT
AIPEEIGHLDSLKSLYLNDNSSLHNLPFELALCQSLEIMSIENSPLSQIPPEITAGGPSL
VIQYLKMQGPYRGVVMTGQ
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggagacatcgaaagagttcgagtttcggccggccaaagagacatcgcggtcgaaaagt
cccggtggaatcgttggtcggttgtcgaatttcgcgagaaataaggctcgacactcgttg
agtgaaaagggctcgaattcggttggtggaagtggtggaagcgggtttgataagccgaga
aaggatcttctgaaggagttccacaaatgcaaagaagcacaggatcaacgtttggatttg
agttcaatcgaaatcacgagcattccatcaccaattaaagagctcacacaactcaccgaa
ctctttttgtacaagaacaaacttacatgtctaccaacggaaatcggtcaacttgtgaat
ctcaaaaagctaggactctctgaaaacgccttatcttctctgcccgactctctttcctca
ctggaatctctagaaactctggatttaaggcataacaagctgacagaagttccagctgtt
atttataaaatcacatcgttggagacgttatggttgaggtacaatcgaattgtggccgtg
gatgagcaaattgggaatttgcaaaaattgaaaatgttggatgttagagagaataagatt
cgagaacttccgtctgcgattgggaagctgtcgtcgttggtggtgtgtctcgtgtcctat
aatcatttgacacgcgttccagaagaaatcggtgaatgccacgcactgactcaactcgat
cttcaacacaacgacctgtcggaactaccgtattccattggaaaattgactaatttggtt
cgaatcggaattcgatacaacaagattcgttgcattccgagtgaattggagagttgtcaa
cagttggaagagttcattgtggagagcaatcatttgcagttgttaccgccaaatctcctg
acaatgctcccaaagatccacacagtcaatctctcaagaaacgagctcacagctttccca
gccggcggaccacaacaatttgtgccgactgtaacgataaacatggaacataatcaaatt
tcaaaaatcccaattggaatcttctcgaaagccacgcggctaacgaaactgaatctgaag
gagaatgagctggtctcgctacctcttgatatgggatcctggacatcaatcaccgaactg
aatctctctacaaatcaactcaaagtgctaccagaagatattgaaaaattagtgaatctg
gaaattctagtcctttccaacaatcaactcaaaaaactgcccaaccaaatcggaaatctc
aaaaaactccgcgagctggatctcgaggagaatgagttggagacggttccaacggaaatt
ggattcttacagcatttgacaaaattgtgggttcagtcgaataagattgtcacactgcca
cgatccattggaaacttgtgttcacttcaggatttgagattgggagaaaataatttgacg
gcgattccagaggagattggtcatttggactctctgaaatctctctaccttaacgacaac
tcttcccttcacaaccttccatttgaattggcactgtgccaatcccttgaaatcatgtcc
attgagaactctcctctttcccaaatcccaccagaaatcactgctggtggaccatcgctt
gtgatacaatacctcaaaatgcaaggaccgtatcgtggagttgtgatgacgggacaataa
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