Caenorhabditis briggsae (nematode): CBG_20137
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Entry
CBG_20137 CDS
T01054
Name
(RefSeq) Protein CBG20137
Organism
cbr
Caenorhabditis briggsae (nematode)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrase_H2C2
rve
zf-H2C2
AAA_30
AAA_11
AAA_19
Motif
Other DBs
NCBI-GeneID:
8583038
NCBI-ProteinID:
XP_045096963
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Position
III:complement(2674117..2680040)
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AA seq
1034 aa
AA seq
DB search
MERKDMSTSPKSQQIIRCLALVLSDQEIEERNRSQQVQQPVQLHLVQPPIRAPVRSVSSP
PVQPAVLQVVQPHVALHEDHDDDQEMESDEIADKIILQELDLTIVYRPGNLNTVCDALSR
YIGDESKEVREKSKKIADVTKPEVTVNSLQHEDLKRIQEDTPWISRIQKLLQEGKSISVD
KYEEKDGIVYMKKKNNLSILLPNDKTITLPIIKQYHQSAHLGAHLGSEKTIANISRRFQW
KNLTDDVKGFIKRCEACQRRKTNSHQETREPLGQLELLERPWERLHADICGPFPITANGN
RYIFTIKDDFTKYVMAFPIEKQDATTICDCFSPTTDPISSQHYLRVVLQLLEVKHSLTAP
YHKSANGTIERVHRTIEESLSSFVNSKQTDWDQKLPFIIFSINSSPHAVTKVSPHRALFG
RELTTPEDIQLGPKPKDCIGSSYLDLEDFEECLKRHLQDLHIIIQERIKDQIGRNKERHM
KTHRVKERKVDRYNVEYADGEKRKIANKDDVRLEGSGEEEISEEEDDEETQEVPEESEED
EDDGSSGTDRRSSKRIDGIKRKGRKRHENGSNNNGKRGGLQNRKTKSRNDETDSSNNLRR
SERIKNKRFSRFKSLSMFKVMYCTVSSSCSSQLDLAHDSKTSQDHHCMDHPTDYDKMSNA
NVNDERKFQNDKLEYQDAECLNEYDVKIWSMARRTVRRSRSRRSTLRSDGMLPEGPPLYA
RSSGVQADKRFSLINSCKIKYTVFNECWDPTFLKTREHRLIKISFTGNEINWLKVGIRMW
IREGIQELDPPQDYNSARSRSRSPRVDDHAQLPRENGEDRQDQLHREVGNEDQEEELIRE
LTPLQREVGYDWSFDTSPGYSPEPRADTPGYDEQPTAQHVPPQQPIYERTPRAQLPEPQV
RYQRAPEPPAVHAPFNFDIRDEQALRYWNDAPESLKLQGVVDNLQVEAKKLLNLIDGVLP
PMNLNKSQLLVVRISMNEDRPLVCIQGGPGTGKTYTHKLFSKKKTNYSRMESKIKFPGEN
GVIRIDQLNSYLFI
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atggaacggaaagatatgagtacatctcccaagtcgcaacaaatcatacgatgtctggcc
cttgtcctttcggatcaagaaatcgaagagagaaataggagtcagcaagtgcaacaacca
gttcaactgcatttggttcagccaccaatccgagcgccagtccgttccgtttcatcgccg
ccagtccagccagcagttctacaggtggtccaaccacatgttgccctgcatgaagatcat
gatgacgatcaggaaatggaaagtgatgagattgctgataagataattctccaagagttg
gatttaacaattgtttatcgccctggtaacctcaacaccgtttgtgacgcgttatcaaga
tacattggagatgaatcaaaagaagttcgggagaagtcgaagaagatcgctgacgtcaca
aaaccggaagttactgtaaactcactacaacatgaggatttgaaacgaattcaagaagat
actccatggatttcgaggattcagaagctgttacaagaaggaaaatcaatttcagtggat
aaatatgaagaaaaggatggtatcgtctacatgaaaaagaagaacaatttgtcaattctc
ttaccaaatgacaaaacgataactctaccgattataaagcaatatcatcaatctgcacat
cttggagcacatcttggatcggagaaaacaattgccaatatttcaagaagatttcagtgg
aagaatttaacggatgatgtcaaaggatttattaaacgatgtgaagcatgtcaacgaagg
aagaccaattcacaccaggagacaagagaaccgcttggacaactggaacttctcgagcgc
ccttgggagcgacttcatgctgacatttgtggaccttttccgataacagcaaatggaaat
cgctatatttttacaatcaaggatgatttcacaaaatacgtcatggcattcccgattgaa
aaacaagatgcaacaacaatatgcgattgcttctcaccgacaacggatccaatttcaagt
caacactatttgagagtggttctacaacttttggaagtaaaacattctctaacggctccg
tatcataaatctgcaaacggaaccatcgagagagtgcatcgaacaattgaggagtcgttg
tcttcgttcgtaaactccaaacaaaccgactgggaccagaaattgccgttcatcattttc
tctatcaattcatcgcctcatgccgtgaccaaagtaagtcctcatcgtgcactttttggt
agagaattaacaacgccggaagatattcaactgggaccaaaaccaaaagactgcattggt
tcatcgtacttggaccttgaagattttgaggaatgtcttaaaagacatcttcaagatctc
cacatcatcatacaagaaaggatcaaggatcaaatcggacggaacaaggaaaggcacatg
aaaacgcatcgtgtcaaagaaaggaaagtggacagatacaatgtcgagtatgccgatgga
gagaagaggaagattgcgaataaagatgatgttcgattggaaggaagcggagaagaggaa
atatcagaagaggaagacgatgaagaaacccaggaggtaccagaagagtcagaagaggat
gaagacgatggatcatcaggaacggatcgaagaagttcaaaaagaatcgatggaatcaag
aggaaaggaaggaaacgtcatgaaaatgggagcaacaacaatggaaagcgaggaggactc
cagaatcggaagaccaaaagcagaaacgacgaaaccgacagcagcaacaatctcagaaga
tcagagaggatcaaaaacaaaagatttagtcgattcaaaagtttatcaatgttcaaagta
atgtattgtactgtctcttcatcatgctcttctcaactcgacctcgctcacgactcgaaa
acaagtcaagatcatcactgtatggatcatcccacggactatgataagatgtcaaacgca
aatgtcaatgatgaacgtaaatttcaaaacgataaactcgaatatcaagatgctgaatgt
ttgaatgaatacgatgtcaagatatggtcaatggcaaggagaacagttcgaagaagtcga
tcgaggcgatcgacattaaggagcgatgggatgttacccgagggaccgcctctttatgcg
cgttcctcgggcgtacaagcggacaagcgtttctctttaataaatagttgtaagattaag
tacaccgtgttcaatgagtgttgggatccaacgttccttaagaccagggaacacaggctt
atcaaaatatcttttacaggaaatgagataaattggcttaaagtcggcatcagaatgtgg
attcgagaagggattcaagaactggatccacctcaagactataattcagcacgctcgaga
tcgagaagcccaagagtcgacgaccacgctcagcttcctcgagaaaatggagaagatcgt
caagatcaactacatcgagaagttggaaacgaagaccaagaagaagagttgattcgagaa
ctgactccacttcaaagagaagtgggatacgactggtcgtttgacacttctcctggatac
tcccccgagccgagagctgatactccggggtacgatgaacagcctactgcacaacatgtg
ccccctcagcaacccatctacgagcgaactcctagagcgcaactgccggaaccccaggtt
cgctatcaaagagcgccggagccgccagccgtccacgccccattcaattttgatattcgg
gatgaacaagctttgagatattggaatgatgctccagagtcactgaagctgcaaggtgtt
gtcgacaacctccaagtggaagcaaaaaagcttttgaatctcatagacggagtcctaccg
ccgatgaacttaaataaatcgcagcttcttgttgtaagaatatctatgaatgaagataga
cctctcgtttgtattcaaggagggccaggaactggaaaaacgtatacgcacaaattattc
tcgaaaaaaaagacaaattattctcgaatggagtccaagataaagttcccgggagaaaat
ggtgtcatccgaatcgaccaattaaattcttatttatttatttaa
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