Caenorhabditis briggsae (nematode): CBG_20142
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Entry
CBG_20142 CDS
T01054
Symbol
Cbr-amx-1
Name
(RefSeq) Protein CBR-AMX-1
KO
K19413
lysine-specific histone demethylase 1B [EC:1.-.-.-]
Organism
cbr
Caenorhabditis briggsae (nematode)
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cbr03036
]
CBG_20142 (Cbr-amx-1)
Chromosome and associated proteins [BR:
cbr03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
CBG_20142 (Cbr-amx-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
DAO
SWIRM
Pyr_redox_2
Pyr_redox
HI0933_like
FAD_binding_3
AlaDh_PNT_C
Thi4
MurD-like_N
Pyr_redox_3
FMO-like
FAD_binding_2
Motif
Other DBs
NCBI-GeneID:
8583041
NCBI-ProteinID:
XP_045096965
WormBase:
CBG20142
LinkDB
All DBs
Position
III:complement(2710386..2725054)
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AA seq
786 aa
AA seq
DB search
MSRVKRACAMATEALKEAKKQRRCTWKIEENCVLALKNCRISANFGQRLSKTEACCAPCF
STTFRGKDYEQEFINWKLMAKDGQMHIKSDQFAKRYVNSRFLPFYKKCRLCGKYAQIATR
EPQTARQFADFQCPTGCENSEEPEDVEKVRRDSGWCFNEFGHPPLLQNNISYDLLVDHYV
TRTTGMDATCQEGAELIENGGVAFRDTRKIMHMFYVPFTDVIANIVHPEFMETDEKFAFP
KFADDPFSIYYLQVRNTIIAMWLKHPFAEITQKMVESQIIVRGHARIFFIEHLIRPILEF
LTIKGIINYGAFDFRIDPLMGKVPVPKIAIIGAGISGMSTARHLQHLGINSVIFEAKDRY
GGRMNDDRTLGVSVGKGAQIIVGNINNPITLLCEQIGLKYRNSNFFCPLIDETGQCLTFE
KRELDDQVDLHYNNVLDAIRNKYQSNRNFPDCTLEEMFSKMSSGLLSAAELDHLYTRDFE
KLLDFHLGNLEFSCGTAVANLSAKEYDHNEKFGNFAGEHAVVTDGAQRIVDYLQRGLEIR
LNSPVKCIDWRGERRVRIQLESGEEQEFDRVVVTTSLAVLKKNPQMFNPRLPAEKRNAID
SLGAGLIEKMAVKFDRRFWSTVDAADGKRTEYFGKVPDSKSDRSLFNIFYDFSGKDPCGE
EVYVLMSYVTAEHVNIVNELSDEQIAEKFVETLRKMFPNAEIHPLAQMCSHWGADPHIGM
SYTFVPFGSDGDATYNRLKETVDDRIHFAGEHTIAAEPQTMAGAYLSGLREASKIVMSAK
RNVMIE
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgtgtgaagcgggcatgtgccatggcgaccgaagcactaaaagaagccaaaaaa
cagcgacgttgtacctggaaaattgaggaaaactgcgttttggcactgaaaaattgtcga
atttcggcgaatttcggccagcgactcagcaaaaccgaagcgtgttgcgcgccatgcttc
tcgacgacgtttcggggcaaagactacgagcaggagtttataaattggaaattaatggca
aaagacgggcagatgcacattaaaagcgatcaattcgccaagagatatgttaatagtcgc
ttcctgccgttttacaaaaagtgccgactatgcggaaaatacgctcaaatcgccacgcgg
gagccccaaaccgcccgtcaattcgccgattttcagtgtcccactggatgtgagaattca
gaagagccagaagacgtggagaaagtcagaagggattctggatggtgttttaatgagttc
ggacatcctccactgcttcaaaataacatttcctacgatttactcgttgatcactatgtc
acaaggaccaccggaatggatgccacgtgtcaggagggggcggagcttatcgagaatggg
ggcgtggctttccgcgatacccggaagattatgcacatgttctatgtaccgtttaccgat
gtgattgcaaatattgtacatccagagttcatggagacggatgagaaatttgcgttccca
aagttcgccgacgatccattctcaatctactacctccaagttcggaatacgatcatcgcc
atgtggctgaagcatccgttcgctgagatcacacagaaaatggtcgaatcgcagatcatc
gtccgcggacacgcccgaatcttcttcatcgaacatctgatcaggccgattttggagttt
ttgacaattaagggaattatcaattatggagcgttcgattttcgcattgatccgttgatg
ggcaaggttccggttccgaaaatcgcaatcatcggtgctggaatatctggaatgtcgacg
gctcgccacctacaacacctgggtatcaattcggtgattttcgaggcgaaggatcgatat
ggtggcaggatgaatgacgatcggacactcggtgtttcagtgggaaaaggcgcccaaatc
atcgttggcaacatcaacaatccgataacactgctctgcgagcaaatcggcctgaaatat
cgaaattccaactttttctgtccgctcatcgatgaaaccggccaatgcctgacgtttgag
aagcgagagctggatgatcaggtggatttacactataataatgtgctggatgcgattcgc
aacaaatatcaatcgaatcgcaattttccggactgtacgctcgaagaaatgttctcaaaa
atgagctctggcctactctcagcggcggaactcgatcatttgtacactcgagatttcgag
aagcttctcgattttcatttgggaaatttggaattttcgtgtgggacggcagtggcgaat
ctctccgccaaagagtacgatcacaacgagaaattcgggaatttcgccggcgagcatgca
gttgtgaccgatggagcacagcggattgttgattacttgcaacgtggactggagattcgt
ctgaattcaccggtcaaatgtattgattggcggggggagagaagagtgaggattcagttg
gagagtggagaggagcaggagtttgatcgggtggtggtgacgacgtcgttggccgtgttg
aagaaaaatccgcaaatgttcaacccccgtctgccagctgaaaaacgaaacgccatagat
tcccttggcgccggactcatcgagaaaatggccgtgaaatttgatcgacgattctggagt
acggtagatgcggcggatgggaagcgaaccgaatattttggaaaagtgcccgattcgaaa
tccgatcgatctcttttcaatattttttatgatttttcgggaaaagacccgtgcggcgag
gaagtgtacgttttgatgtcctatgtgacggccgaacatgtaaatattgtgaacgagctg
tccgacgaacaaatcgccgagaaatttgtggaaacccttcggaaaatgttcccaaacgcg
gaaattcatccgttggcacagatgtgttcgcattggggtgccgatccgcacattggaatg
tcgtatacgtttgtgccgtttgggtcggacggtgatgcgacgtataatcgattgaaggaa
accgtcgacgaccgtatccatttcgctggtgagcacacgatcgcagcggagccgcaaacc
atggccggagcatatctatcaggactgcgggaagcgtcgaaaattgtgatgagtgccaag
aggaatgtgatgattgaatga
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