KEGG   Caenorhabditis briggsae (nematode): CBG_20219
Entry
CBG_20219         CDS       T01054                                 
Name
(RefSeq) Protein CBG20219
  KO
K10265  F-box and WD-40 domain protein 9
Organism
cbr  Caenorhabditis briggsae (nematode)
Brite
KEGG Orthology (KO) [BR:cbr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cbr04121]
    CBG_20219
Ubiquitin system [BR:cbr04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     CBG_20219
SSDB
Motif
Pfam: WD40 WD40_Prp19 Beta-prop_TEP1_2nd WD40_CDC20-Fz Beta-prop_RIG_2nd Beta-prop_TEP1_C Beta-prop_EML_2 WDR55 WD40_WDHD1_1st EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st F-box-like Beta-prop_WDR19_2nd
Other DBs
NCBI-GeneID: 8572883
NCBI-ProteinID: XP_045096980
WormBase: CBG20219
LinkDB
Position
II:1258608..1264799
AA seq 368 aa
MTTDAGNTPELASLPSELLCQLFTYLPNRKLITEIPLRTEHLVHQPECEVSHPNYQPKRS
FHSMRTARSRFRDWETQTVHVALGHSATVDSVLLFKTEQQHKQFCLSGSRDRTIRLWDLE
NVRNGVEDTWTVAKDETAHLGWIWNMARDDTTATGSPNELVCTTFAKRVAVIDDRSSEIV
AEHKLHKRAVIALAVDGNRIYTSSEDRIMMMVDRRQMGRALLFEYSPSCYKSCLSLQRDQ
LLTSTSDGKVKLYDAKNFNVLQTYTVGSYTRQVQLDHGAHLVMARSARTRYKFSIFSPGT
RSRQWGASHELAAEPAKFDYLPSTKTLAIGNGDSSILFCFPPSENAENLAENVENLAENP
AENPPNLE
NT seq 1107 nt   +upstreamnt  +downstreamnt
atgacaactgatgccggcaacaccccagaattggcctccctaccatccgaactcctctgt
caactattcacctacctcccaaatcgaaaattgatcactgagattccgttgcgtaccgaa
cacctggtccatcaaccggaatgcgaagtgtcccatcccaactaccaacccaaacgctca
ttccactcaatgcgaaccgcccgttcgagattcagagactgggagacgcagacggtgcac
gtggcacttggccactcggctactgtagactcggtgctgctattcaagactgagcaacag
cacaaacaattctgtctatccggctcgcgggaccgaacgatacgtctgtgggatctggag
aatgtgaggaacggtgtggaggacacgtggacggtcgccaaggatgagaccgcccatttg
ggatggatttggaatatggcgagggacgacactacggccaccggctcgcccaacgaattg
gtctgcaccacgttcgccaagcgtgtagctgtcatcgacgatcgctcatctgaaattgtc
gccgagcacaaactacacaaacgggcggtcattgcgttggctgtagatggaaatcggatt
tacacgagttccgaggatcgtattatgatgatggtggatagacgacaaatgggacgagcg
ctgctttttgaatactctccatcgtgctacaaatcgtgcctctccctgcaacgtgatcag
ctgctcacatcgacttcagatggaaaagtcaaactttatgatgccaaaaatttcaacgta
ctgcagacgtatacggtcggctcctacacccgccaagtacaactggaccatggagcgcac
ttggtgatggcgcgaagcgcgcggacgagatataaatttagtatcttcagcccaggaacc
cgtagtcgacaatggggcgcgtctcacgagctggctgccgaaccagccaaatttgactat
ctaccatccacaaaaacgttggcaatcggaaatggcgatagctcgattttgttctgcttc
ccaccatcggaaaatgctgaaaatttggctgaaaatgtggagaatttggctgaaaatcct
gctgaaaatccaccgaatttggaataa

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