Caenorhabditis briggsae (nematode): CBG_20219
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Entry
CBG_20219 CDS
T01054
Name
(RefSeq) Protein CBG20219
KO
K10265
F-box and WD-40 domain protein 9
Organism
cbr
Caenorhabditis briggsae (nematode)
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cbr04121
]
CBG_20219
Ubiquitin system [BR:
cbr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
CBG_20219
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
F-box-like
Beta-prop_WDR19_2nd
Motif
Other DBs
NCBI-GeneID:
8572883
NCBI-ProteinID:
XP_045096980
WormBase:
CBG20219
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Position
II:1258608..1264799
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AA seq
368 aa
AA seq
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MTTDAGNTPELASLPSELLCQLFTYLPNRKLITEIPLRTEHLVHQPECEVSHPNYQPKRS
FHSMRTARSRFRDWETQTVHVALGHSATVDSVLLFKTEQQHKQFCLSGSRDRTIRLWDLE
NVRNGVEDTWTVAKDETAHLGWIWNMARDDTTATGSPNELVCTTFAKRVAVIDDRSSEIV
AEHKLHKRAVIALAVDGNRIYTSSEDRIMMMVDRRQMGRALLFEYSPSCYKSCLSLQRDQ
LLTSTSDGKVKLYDAKNFNVLQTYTVGSYTRQVQLDHGAHLVMARSARTRYKFSIFSPGT
RSRQWGASHELAAEPAKFDYLPSTKTLAIGNGDSSILFCFPPSENAENLAENVENLAENP
AENPPNLE
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgacaactgatgccggcaacaccccagaattggcctccctaccatccgaactcctctgt
caactattcacctacctcccaaatcgaaaattgatcactgagattccgttgcgtaccgaa
cacctggtccatcaaccggaatgcgaagtgtcccatcccaactaccaacccaaacgctca
ttccactcaatgcgaaccgcccgttcgagattcagagactgggagacgcagacggtgcac
gtggcacttggccactcggctactgtagactcggtgctgctattcaagactgagcaacag
cacaaacaattctgtctatccggctcgcgggaccgaacgatacgtctgtgggatctggag
aatgtgaggaacggtgtggaggacacgtggacggtcgccaaggatgagaccgcccatttg
ggatggatttggaatatggcgagggacgacactacggccaccggctcgcccaacgaattg
gtctgcaccacgttcgccaagcgtgtagctgtcatcgacgatcgctcatctgaaattgtc
gccgagcacaaactacacaaacgggcggtcattgcgttggctgtagatggaaatcggatt
tacacgagttccgaggatcgtattatgatgatggtggatagacgacaaatgggacgagcg
ctgctttttgaatactctccatcgtgctacaaatcgtgcctctccctgcaacgtgatcag
ctgctcacatcgacttcagatggaaaagtcaaactttatgatgccaaaaatttcaacgta
ctgcagacgtatacggtcggctcctacacccgccaagtacaactggaccatggagcgcac
ttggtgatggcgcgaagcgcgcggacgagatataaatttagtatcttcagcccaggaacc
cgtagtcgacaatggggcgcgtctcacgagctggctgccgaaccagccaaatttgactat
ctaccatccacaaaaacgttggcaatcggaaatggcgatagctcgattttgttctgcttc
ccaccatcggaaaatgctgaaaatttggctgaaaatgtggagaatttggctgaaaatcct
gctgaaaatccaccgaatttggaataa
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