KEGG   Caenorhabditis briggsae (nematode): CBG_20339
Entry
CBG_20339         CDS       T01054                                 
Name
(RefSeq) Protein CBG20339
  KO
K03066  26S proteasome regulatory subunit T6
Organism
cbr  Caenorhabditis briggsae (nematode)
Pathway
cbr03050  Proteasome
Brite
KEGG Orthology (KO) [BR:cbr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03050 Proteasome
    CBG_20339
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:cbr03051]
    CBG_20339
Proteasome [BR:cbr03051]
 Eukaryotic proteasome
  Regulatory particles
   PA700 (19S proteasome)
    ATPase subunits
     CBG_20339
SSDB
Motif
Pfam: AAA AAA_lid_3 Prot_ATP_ID_OB_C AAA_5 AAA_2 AAA_16 nSTAND3 AAA_22 RuvB_N PRS7_OB TIP49 AAA_24 AAA_lid_PRS2_C AAA_28 AAA_3 AAA_33 AAA_14 NPHP3_N AAA_18 Mg_chelatase ABC_tran Parvo_NS1 ATPase IstB_IS21 AAA_25 FapA PhoH AAA_7 Seryl_tRNA_N AAA_17 Sigma54_activat DUF815 bpMoxR RNA_helicase Cluap1 DUF5906 AAA_19 Prominin Zeta_toxin TsaE V_ATPase_I COG4_N AAA_11 ORC-CDC6-like DUF16 GAS
Other DBs
NCBI-GeneID: 8588502
NCBI-ProteinID: XP_002646506
WormBase: CBG20339
UniProt: A0AAE9J0F5 G2J711
LinkDB
Position
I:complement(12072465..12074559)
AA seq 415 aa
MEPAPTFPNSRKKERTITISENSNENTLRQYWKTKLDEAEQQVREKEQTIRRLGASKNEL
NGKVGQLKEEINRLHEQASHVGEVCKAMDKKKVLVKSHPDGKYIVNVDSVSVDMSQMTAG
TRVAMKADSYMIHKVLPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKH
PELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGARMV
RELFVMAREHAPSIIFMDEIDSIGSSRVEGSSGGDSEVQRTMLELLNQLDGFEATKNIKV
IMATNRIDILDSALLRPGRIDRKIEFPAPDEKARAQILKIHSRKMNLMRGIRMDKIAEQI
PGASGAEVKSVCTEAGMFALRERRIHVTQEDFEMAVGKVMQKDSDKNMSVKKLWK
NT seq 1248 nt   +upstreamnt  +downstreamnt
atggaaccagctccaacattcccaaattcccgtaaaaaggagcggactatcactatcagt
gagaattccaacgagaacacacttcgacagtactggaaaactaagctagatgaggcagag
caacaagtgcgtgagaaggagcaaacgattcgtcgtttgggcgcatcgaagaatgagttg
aatggaaaggtgggacagttgaaagaagaaatcaatagattgcatgaacaagcaagtcat
gtaggagaagtatgcaaagcaatggataaaaagaaagtacttgtgaagagtcatccggac
ggcaaatacattgtcaacgtggattctgtatcggtggatatgtctcaaatgacagctgga
acacgggttgcaatgaaagcagatagctatatgattcataaagtgttaccgaataaagtg
gatccattggtatcactgatgatggttgaaaaagtgccagattcaacatatgaaatggtt
ggaggacttgataaacagattaaagaaatcaaggaagtcatcgaattgcctgtcaaacat
cccgaattgttcgatgcactcggtattgctcagcctaaaggagtgcttctttatggaccg
cccggaactggaaagactcttttagcacgtgctgttgctcatcacactgaatgcactttt
atccgtgtttctggttcggaacttgttcagaagttcattggagaaggtgctagaatggtt
cgtgaactgttcgtcatggctcgtgaacatgctccatcaatcattttcatggatgaaatc
gattcgattggatcgtcaagagtcgaaggatcgagtggtggcgattctgaagtacagaga
acaatgctcgagttgctcaatcagttggatggttttgaggctaccaagaacatcaaggta
atcatggcgacgaatcgtatcgatattctggattccgcgctcctccgtcccggacgtatc
gatcgaaaaatcgaatttccggctccagacgagaaggcacgtgcacagattctgaagatt
cactctcggaagatgaatctgatgcgtggaattcgaatggacaagattgctgagcagatt
ccaggtgcatctggagcagaagtgaaatcagtttgtacggaagccggaatgtttgcactc
cgtgaaagacgtattcatgttacacaagaggatttcgagatggctgttggaaaagtgatg
caaaaggattccgataagaatatgtccgtcaagaagttgtggaaataa

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