KEGG   Caenorhabditis briggsae (nematode): CBG_20416
Entry
CBG_20416         CDS       T01054                                 
Symbol
Cbr-cdk-9
Name
(RefSeq) Protein CBR-CDK-9
  KO
K02211  cyclin-dependent kinase 9 [EC:2.7.11.22 2.7.11.23]
Organism
cbr  Caenorhabditis briggsae (nematode)
Pathway
cbr03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:cbr00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    CBG_20416 (Cbr-cdk-9)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:cbr01001]
    CBG_20416 (Cbr-cdk-9)
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cbr03021]
    CBG_20416 (Cbr-cdk-9)
Enzymes [BR:cbr01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.11  Protein-serine/threonine kinases
    2.7.11.22  cyclin-dependent kinase
     CBG_20416 (Cbr-cdk-9)
    2.7.11.23  [RNA-polymerase]-subunit kinase
     CBG_20416 (Cbr-cdk-9)
Protein kinases [BR:cbr01001]
 Serine/threonine kinases: CMGC group
  CDK family
   CBG_20416 (Cbr-cdk-9)
Transcription machinery [BR:cbr03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     CBG_20416 (Cbr-cdk-9)
    Brd4/P-TEFb complex
     CBG_20416 (Cbr-cdk-9)
    7SK RNP complex
     CBG_20416 (Cbr-cdk-9)
SSDB
Motif
Pfam: Pkinase PK_Tyr_Ser-Thr ABC1 Kinase-like Haspin_kinase Pkinase_fungal
Other DBs
NCBI-GeneID: 8588554
NCBI-ProteinID: XP_045097036
WormBase: CBG20416
LinkDB
Position
I:complement(12432085..12441819)
AA seq 464 aa
MSSQPYPAALHQSSTQSRTLISQNGQNTPTGGGTPNSGTGAPELDVRQQLLNYQKMFDQA
AYPFINDASAYEKLSKIGQGTFGEVFKARCKSTGRMVALKKILMANEKEGFPITALREVK
MLEQLKHPNIIDLIEVCSAKSSAPATKDRTTFYLVFSFCEHDLAGLLSNPKVRMSLLHIK
TMIKHLITGLNKLHRSKILHRDMKAANVLISREGVLKLADFGLARPFVQRENSNVPRALY
TNRVVTLWYRPPELLLGDRSYGTKIDVWGAGCIMAEMWTRQPIMQGDTEQRQLQLISALC
GSINQEVWPNCVKMPLWNVMSSDTNTPLPQGKKRVLRSKLRHLMRLDGPDGRSQSDPYGK
GKPNEHLPADDDAMNLLESLLAIDPDKRPTADEAEDDIWFYKEPLPKANVQDLMDTIPTS
QFEYTVGKGAHAGRGRHHNNQPRPNQAQRQSNAIPAGQYRDTIF
NT seq 1395 nt   +upstreamnt  +downstreamnt
atgagctcacaaccctatccggccgcactgcatcaatccagcacgcagagcaggaccctg
atcagccaaaatggccaaaacacgccgacgggtggcggtacgccgaacagtggcacagga
gcaccggagctcgacgtccggcagcaattgctaaattatcagaagatgttcgatcaggcg
gcgtatccattcatcaacgacgcgtccgcctacgagaaattgagcaaaattggacaggga
acgtttggagaagtgttcaaagcacgatgcaaatcgacgggtcgaatggtggcactgaag
aaaatcctcatggcgaacgagaaggagggattcccgattacggcgttgagagaggtgaag
atgttggaacaactcaaacaccccaatatcattgatttgatcgaggtgtgcagtgcgaaa
agctccgcccccgcgacgaaagaccgtaccaccttctacctggtcttctcattctgtgaa
cacgacctggctggtcttctatcgaatccaaaagtccggatgtcccttttgcatatcaaa
acgatgataaaacatctgataacgggactcaacaaactgcatcgaagcaaaattctacac
agagacatgaaggcggcgaacgtattgatatccagagaaggagtgctgaaattggccgat
ttcggattggctagaccgtttgtgcagagagaaaactcgaacgtgccccgtgctctgtat
acgaatcgtgtcgtcaccctatggtatcgcccaccagaactgctactcggcgatcgatca
tacggtacaaagatcgacgtgtggggtgctggatgtattatggccgaaatgtggacccgt
cagccgatcatgcaaggagacaccgaacagagacagttgcagttgatttcggcactttgt
ggatccattaatcaggaggtatggccaaactgtgtgaaaatgccgctatggaatgtaatg
tcatctgatacgaacactccacttccacagggcaaaaaacgggttttacggtcgaaacta
cgtcatttgatgcgtctggacggtcccgatggacgatcacaatcggacccttacggcaag
ggtaaacccaacgaacacttgccggctgacgacgacgcgatgaatctactggaaagcctt
ctggctatcgatccggataagagaccgacggctgatgaggcagaagatgacatctggttt
tataaggaaccactgcccaaggcaaatgtccaggatttgatggataccattccgacatcc
caattcgagtacactgtgggaaaaggcgcccacgccggccgcggccgccaccacaacaac
cagccacgtccgaatcaggcacaacgtcagtcgaatgccattccggctggacagtatcgg
gatacgattttttga

DBGET integrated database retrieval system