KEGG   Caenorhabditis briggsae (nematode): CBG_20440
Entry
CBG_20440         CDS       T01054                                 
Symbol
Cbr-tsr-1
Name
(RefSeq) Protein CBR-TSR-1
  KO
K15436  transportin-3
Organism
cbr  Caenorhabditis briggsae (nematode)
Pathway
cbr03013  Nucleocytoplasmic transport
cbr03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:cbr00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    CBG_20440 (Cbr-tsr-1)
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    CBG_20440 (Cbr-tsr-1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:cbr03016]
    CBG_20440 (Cbr-tsr-1)
Transfer RNA biogenesis [BR:cbr03016]
 Eukaryotic type
  tRNA transport factors
   tRNA import factors
    CBG_20440 (Cbr-tsr-1)
SSDB
Motif
Pfam: TPR_TNPO3_IPO13_4th TPR_TNPO3_IPO13_2nd Xpo1 TPR_TNPO3_IPO13_3rd
Other DBs
NCBI-GeneID: 8574057
NCBI-ProteinID: XP_045097045
WormBase: CBG20440
LinkDB
Position
II:14732121..14749163
AA seq 970 aa
MDSIDTVCRAIDAFYSGGPETQLAQKFLQNFQETVILAHFPPISAHFGPFFMDFKPFFMD
FGPXXXXXXXXXXXXRHGAVAHDAQSEATTTQLCLAIADLYIQVPTWNNWIFELLAQCQS
LEGDRTQMTLTLLQVFPEEAENIRGIGENRRAAIREELAACEQPMISFLSHVLEKFHTNM
EVLKKVFKCLESNLQNQAMRTDHFAVSPLISSVFHVIASIDPNIPSTLHETATNCVVAAL
YRVEDIETHAKLAEIIHKGVISLVEPFEKAQQMEDMDRLQNIARIFVELIESFYVQIVND
ANPDPQAVGSLACFDLLLLVANHHDYSLIEMTFGVWYRVTEELFKYDDDQYIGRFRPYAE
RFIMCLYDHCKMEPDDTEDVLDDSSEFGEFRTKAIEALRDVVFIVNSDKCIQMMHQKILE
LCQKPGAGWEESEAALFVMAAVVQNILPESEGHMPDIIRLVTSLPIESPPALIVTALNLL
SDLNDWLELHTHLLEPVVQWILRFATDPTFAYHVAVVFDRITCRCAVQLQGLLPQLLSLI
TALQTTRTNGIRVEEAICNLTRACATIIAKLPPAESKLAMEQLCEPIITNLNRTVDATDA
THANNNNNNTGGGGNKENEGGHRGKTYESWASLSSRPILWIDRCAFVFKDVWNPSNRAAV
PSMQEQCLWLPVAQKLIEALLKAARKFEGTPRIIEHAIRSVRLIFRALGPQSMPFVEEVV
TMMIETYPKHRHSSFLYLASVIVDEYGQLDKMRPGLLQMLEVLSHNTFPLLQGLGAVNHP
DTVDDLFRLAQRFTMRATTVFFTNVVSQMLFVCAVSNIWLDHMEASRSIIKFVVEVLDQL
ASAKRVKYTDDGVTAAQLLVNQQAEKIMDSALWMSLFSHSGQVRREMADLILQIGRHDEE
KFKERLAHAVSALPNAPLKATPQQLTEFVENVVKEIFQFSIISESGTFKNSKTQFSERSR
NIAFFEIQKF
NT seq 2913 nt   +upstreamnt  +downstreamnt
atggactcgatagacactgtgtgtcgagccatcgacgcattctatagtggtggaccggag
acgcagctggcacagaaattcttgcagaatttccaggaaacggtcattttagctcatttt
ccgcctatttcggctcattttggaccatttttcatggattttaagccatttttcatggat
ttcggaccannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnccgccacggagccgtc
gcccacgatgctcaatcggaagccacaacgacccagttgtgtctagcgatcgctgacctc
tatattcaggtgccaacgtggaataattggattttcgaactgttggctcaatgtcaatcg
ctggaaggtgaccgtacccagatgacactgaccctcctacaagtgttcccagaagaggct
gaaaatatccgaggaattggcgagaatcgacgagccgcgatccgagaggagttggccgct
tgtgagcagccaatgatcagttttttatcccatgttctcgagaaattccacacgaatatg
gaggtgttgaaaaaagtcttcaagtgtctggaatcgaatcttcagaatcaggcgatgcgc
acggaccattttgcggtatctccactgatttcatccgtattccacgtcatcgcatcaatc
gacccgaatattccatcaacactacatgaaacggcgacgaattgtgtcgttgcggcactt
tatcgagttgaagacattgaaacacacgcaaaactggctgaaattatccataaaggtgtc
atttcgctggtcgaaccgttcgagaaggcccagcagatggaagatatggatagactgcag
aacattgcccgtatattcgtcgagctcatcgaatcgttctacgttcaaatcgtcaacgac
gcgaatccggacccgcaggcggtgggaagtttggcgtgttttgatttgttgctgctggtg
gccaaccatcatgattattcgctcatcgaaatgacatttggggtgtggtatcgtgtgacc
gaggagctcttcaaatacgacgacgatcagtacattggccgtttccgtccgtacgccgag
agattcattatgtgcctctatgatcactgtaaaatggagccagacgatacagaagacgtg
ctggacgactcgtcagaatttggagaattccgaacgaaggccattgaagcgttgcgggat
gtggttttcattgtcaactcggataagtgtattcagatgatgcatcagaagattctggaa
ctgtgccaaaagccgggcgccggatgggaggagtctgaagcggcgttgtttgtgatggcc
gccgtcgttcagaatatattaccagaatccgaaggacacatgcctgacatcatccgtctg
gtgacgtcactgccaatagaatcaccaccagcactaattgtgacggcgttgaacttacta
tcggatttgaatgattggttggagctgcacacacatttgctggaacccgtcgttcaatgg
attctgcgattcgccacggaccccacattcgcctatcacgtcgctgtggtttttgatcgg
atcacatgccgatgtgccgtccaacttcaaggtctcctcccgcaattgctcagccttatc
accgcactacaaactacacgaaccaacgggatacgcgtcgaggaggcgatttgtaacctg
acacgagcgtgtgcgacgataatcgcgaaactaccgccggccgagtcgaaattggcaatg
gagcagctttgcgaaccgattatcacgaatttgaataggacagtcgacgctacggatgcc
acccatgccaacaacaataacaacaatacgggcggtggtggaaataaggaaaacgaagga
ggccatcgtgggaaaacgtacgaatcgtgggcatcgctctcgtcacgacccattttatgg
atcgatcgatgcgcttttgtgtttaaagacgtttggaatccatcgaatcgagccgccgtt
ccatcgatgcaggagcaatgcctatggctcccagtcgcccaaaaattgattgaagcactt
ttgaaagcggcgagaaagtttgaaggcaccccacggatcattgagcacgccattcgatct
gtccggctcattttcagggctctcggaccacaatccatgccttttgtggaggaagttgtc
accatgatgatcgaaacgtaccccaaacaccgacattcgtcgttcctgtacctggcatcg
gtgattgttgacgagtatgggcagctggacaaaatgcggcccggacttttgcaaatgcta
gaggtgctctcccacaacacattccccctattacaaggattgggcgccgtgaatcatccg
gatacggtagacgatctattccgactggcacagcgattcacaatgcgcgcgactaccgta
ttcttcaccaacgtcgtctcgcaaatgctcttcgtttgcgcggtctcgaatatctggttg
gatcatatggaagcgtcgagaagtatcatcaaatttgttgtcgaggtgttggatcagcta
gcgtcggcgaaacgggtaaaatacacggatgacggtgtgacggccgcccaactcctcgtc
aatcaacaagctgagaaaattatggattccgcactctggatgtcacttttctcgcattcc
ggacaagttcgaagagagatggccgacttgattcttcaaattggacggcacgatgaagag
aaattcaaagaacgtctcgcccacgccgtctcggctctccccaacgccccgctcaaagcg
acaccacaacaactgacggaattcgtggagaatgtggttaaagaaatttttcaattttct
ataatttcagaatctgggacgttcaaaaattctaaaactcaattttctgaaagatctcga
aatattgcattttttgaaattcagaaattctga

DBGET integrated database retrieval system