KEGG   Caenorhabditis briggsae (nematode): CBG_20462
Entry
CBG_20462         CDS       T01054                                 
Symbol
Cbr-xpa-1
Name
(RefSeq) Protein CBR-XPA-1
  KO
K10847  DNA-repair protein complementing XP-A cells
Organism
cbr  Caenorhabditis briggsae (nematode)
Pathway
cbr03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cbr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    CBG_20462 (Cbr-xpa-1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cbr03400]
    CBG_20462 (Cbr-xpa-1)
DNA repair and recombination proteins [BR:cbr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     CBG_20462 (Cbr-xpa-1)
SSDB
Motif
Pfam: XPA_C XPA_N CENPU EDR4-like_1st Zn_ribbon_NUD zf-ZTF2_1
Other DBs
NCBI-GeneID: 8588576
NCBI-ProteinID: XP_002646580
WormBase: CBG20462
UniProt: A8XXU8
LinkDB
Position
I:complement(<6796870..>6797690)
AA seq 241 aa
MPKRSYNPSANEEDKVPIVEKLYRENQESDYIGGGFCEDDDEVQERREQISEMRQKRADA
AFSSTKAPDNCEKCEKVLMDSWLWERYNCAVCDACRDDKGEHKLLARTEVKTTYMLKDCD
LDLRKPPLRFWAKKNPHNPRYGDMKLYLKCQVEQRVIEVHGSFEELEMKKEIREQSKEVR
AEKQFEKKLKDLRQQIRGNAGMRTDFGKPHTHEFGKETHVKEDTWKRTCSTCEYEEVFEK
L
NT seq 726 nt   +upstreamnt  +downstreamnt
atgccaaaacgtagttacaacccatcagcgaatgaggaagacaaagttccgattgtggag
aagttgtaccgagaaaaccaggaatccgactatattggtggtggattttgcgaagatgac
gacgaggttcaggagcgtcgagagcagatttcggaaatgagacaaaagcgcgccgacgca
gcgtttagctccacaaaagcacccgataattgcgaaaaatgcgagaaggttctgatggat
agttggctgtgggagagatacaattgtgcagtttgtgatgcttgtagagatgataaggga
gagcacaaattgctggcaagaactgaagtgaagacgacgtatatgctcaaagattgtgac
ctggatcttcgaaaaccaccattgagattttgggccaaaaagaatccgcataatccgaga
tatggcgatatgaagttgtatcttaagtgtcaggtcgaacaacgcgtcatcgaagttcat
ggaagcttcgaagagctcgaaatgaagaaggagattcgtgagcaatcgaaagaggtccgt
gccgaaaagcaatttgagaagaaactcaaggatcttcgacaacagatccgtggcaacgcc
ggaatgcgaactgacttcggaaagccgcatacacacgaattcggaaaagaaactcatgtg
aaggaagacacgtggaagcgcacatgctcgacttgtgaatacgaggaagtcttcgagaag
ctataa

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