KEGG   Caenorhabditis briggsae (nematode): CBG_20485
Entry
CBG_20485         CDS       T01054                                 
Symbol
Cbr-him-1
Name
(RefSeq) Protein CBR-HIM-1
  KO
K06636  structural maintenance of chromosome 1
Organism
cbr  Caenorhabditis briggsae (nematode)
Brite
KEGG Orthology (KO) [BR:cbr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cbr03036]
    CBG_20485 (Cbr-him-1)
Chromosome and associated proteins [BR:cbr03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   Cohesin complex
    CBG_20485 (Cbr-him-1)
  Meiosis-specific proteins
   Cohesin complex and associated proteins
    CBG_20485 (Cbr-him-1)
SSDB
Motif
Pfam: SMC_N SMC_hinge AAA_21 AAA_23 AAA_15 AAA_29 CENP-Q Phage_phiJL001_Gp84_N
Other DBs
NCBI-GeneID: 8588597
NCBI-ProteinID: XP_045097060
WormBase: CBG20485
LinkDB
Position
I:complement(6701596..6706888)
AA seq 1289 aa
MRGGSSGGTGTTSNGLTSTVDSLPGKGHLHTLEIENFKSYKGKHIIGPFSRFTAIIGPNG
SGKSNLMDAISFVLGERPTSLRVKKYTDLIHGAPINRPVGKKCRVTMNYKYADGTIKAFA
RGVNNGTSENYLDGQLVTKEAYAAEMESIQIFIKARNFLVYQGAIESIAMKNPKERTQLF
EELSRSYEFQNEYEKLKNEMTKAEDDTQHNMNKRRGIAQEKREAKMEKDEAEKYQTMKNE
LAAKSTMLYLHQLFHCERLIDESKEKINEQKKIIAALETTKTAEELKIQAVHTEHKKVQR
EVQKLNRKLDSQESALAQKQQERLSLKVAVAHEFKKLESANKALSAAEALAENSAAQLAD
LKKRKADMEGQKVAYEAEVQGMMDGGDLNLSEEQRNEYQELRNLADQESALIQRNLLTAV
QVLEGHKSCLNHELRKQKEMQERVRQKEADVQRLERQIAALSTKIAETEEEHKALVKALK
KLEDSVVIDKSAMGDLSKELIAVNRQLSDASGDSAEGERNQRRVEAITSLKSAFPEAVYG
RLVDLCQPSHKRFNIATTKILQKHMNSIVCDTEETAHKAIEFLKTNRFATETFLPNDALV
VNPINEKLREIRRPVGVKLVFDVINVQNQNARKALQFVCGNSLVCENQDDAKALAYGGTE
LKDRYKAVSMDGTLFQQSGVLSGGSADLRQKAKKWDEKVVKQLREKRDNLNEKIADLQKH
RRREIEVEAERGKIASIEQRLIMWKNELKSLQQNHLMRLQNELEGLNAEEEQIPPKIERW
QEKVQESQAVVQNLETASNKVADEKFAGFCQRLGIESIRDYENRELRIQQEIRDKIRSFD
DELEKLNYEIDFLTEQDGNKKVADEKKKVAKIDATYKEMKSKEKAAKNAEEQHIAATEEV
KAVLEEKKALAAKLEAEWNEAKKASQSSLKEYTKAEKTLVAVESLMKKKQYERHSLLHSV
KLGQLALPLKSGMEIPNRIVSIFVPKAPDDMSDSDSQTDGAADRPSVSDEQIQREQHIKI
NYDSLPHDYKEIDDDDGVRQATNRLNVEIEELQKNVSKMNAPNLRANQRMAEVREREAES
SDQLEAARRKAKAIRQKFERVKTERYRRFQDFFEPVSNNIDDIYKHLSRNTSAQAFLGAE
NMEEPYLDGIQYNCVAPGKRFRPMDNLSGGEKTIAALALLFAVHGRNPAPFFVLDEIDAA
LDNTNIGKVASYICEYARDHMQIIVISLKEEFYNKADSLIGIFPYPAACTTSGVLTFDLT
RFKQIGINEMTDNPPPSTPSSSSASVAGH
NT seq 3870 nt   +upstreamnt  +downstreamnt
atgcgtggaggtagctccggcggtaccggaactaccagtaatggtctcacctctaccgta
gacagtttacccggaaaaggccatcttcacactttggaaatcgagaatttcaaatcttac
aaaggaaagcatattatcggcccattcagcagatttactgctattattggaccgaatgga
tctggaaaatcgaatttgatggatgcaatttcctttgttctcggagaacggccaaccagt
ttgcgtgtcaagaaatatactgatctcattcatggagctccgattaacagaccagttgga
aagaaatgccgcgttacaatgaattacaaatatgcggacggaacgataaaagcttttgcc
agaggtgttaataacggaacttctgaaaactacctcgacggacagctagttaccaaagaa
gcgtatgctgctgagatggagagtatccagattttcatcaaagccagaaatttcctagtt
tatcaaggagccattgagagcatcgctatgaagaatccaaaagagcgaactcaacttttc
gaggagctctctcgctcctacgaattccagaacgagtatgaaaagttgaagaatgaaatg
acgaaggccgaagatgatactcaacacaatatgaacaaacgtagaggaattgctcaggag
aagagagaagccaagatggagaaggatgaggctgaaaagtatcaaacgatgaagaatgag
ttggctgccaaatcaactatgctctatcttcatcaactattccattgtgagcgattgatc
gacgagtctaaagagaagatcaacgagcagaaaaagatcattgccgcattggaaaccaca
aagactgcagaagagttgaagattcaagcagttcataccgaacacaagaaagtgcagaga
gaagttcaaaaactcaatcgaaagctggatagtcaagagtcagctctagcacaaaagcag
caggaaaggctctctttgaaggtggcagtggctcatgaattcaaaaagttggagtccgcg
aataaagcattgtctgccgcagaggcattggctgaaaatagtgcagctcagttggcagat
ctcaaaaagaggaaggctgatatggaaggacaaaaagttgcttatgaagctgaagttcag
ggaatgatggacggaggagacttgaatttatccgaagagcagcgtaacgaatatcaagag
ctcagaaatcttgctgatcaagagtcggcgctgattcaaagaaatcttttgactgctgta
caagtgttggaaggacacaaaagttgcttgaaccacgaacttcggaagcagaaggaaatg
caggaaagagttagacagaaggaagcagatgtccagagactcgagagacaaatcgcggca
ctcagcacgaaaatcgcggagaccgaagaagagcataaagctttggtgaaggctctgaag
aagttggaggactcggtggtcattgacaaatcggctatgggagatctcagcaaggaattg
attgctgttaaccgtcaactctcagatgcatccggtgactctgcagaaggagagagaaat
caacgacgtgtggaagcgataacaagtttgaagtcggcgtttccagaagctgtgtatgga
agactcgtcgatttgtgtcagccatcgcataaaagattcaatattgcaactaccaagatt
cttcaaaagcatatgaacagtattgtctgtgataccgaggagactgctcataaagctatt
gagttcttgaagacgaatcgttttgccacagaaaccttccttcccaatgacgctcttgtc
gtcaacccaatcaacgagaagcttcgcgaaattcgtcgtccagtcggtgtgaaactcgtc
ttcgatgtgatcaatgtccaaaatcaaaacgctcgaaaagcactgcaattcgtttgtgga
aactcgttggtttgtgaaaatcaggatgatgccaaagcactggcatatggtggaactgag
ctgaaggatcgttacaaggccgtttccatggacggaaccctcttccaacagtctggtgtt
ctatccggaggatctgcggatcttcgtcaaaaagccaagaagtgggatgagaaagtggtc
aagcagctccgcgagaaacgcgacaatttgaacgaaaagatcgccgatctccagaagcat
cgccgtcgtgaaattgaagttgaagctgaaagaggaaagattgctagcatcgaacaaaga
ttgattatgtggaagaatgagttgaagtctcttcagcagaatcatctgatgagacttcag
aatgagttggaagggttgaatgctgaagaggaacagattccgccgaaaatcgagcgctgg
caagaaaaggtccaggaaagccaagcggttgttcaaaatttggaaactgcgagtaacaaa
gtggctgatgagaaatttgccggtttttgccaacgccttggtattgaatccattcgagac
tacgagaaccgcgaattgcgtatccagcaggagattcgagataagattcgatcatttgac
gacgagctcgagaagttgaactatgaaattgacttcctgaccgaacaagatggcaacaaa
aaagttgccgatgaaaagaagaaggtcgctaaaattgatgcaacatataaggaaatgaaa
tcaaaggagaaagccgccaaaaacgccgaggagcaacacatcgcagcgaccgaggaagtg
aaggcggtattagaggagaaaaaagcgttggccgcgaagctcgaggcagaatggaatgaa
gctaaaaaggcatcacagtcatcgctgaaagagtatacaaaggctgagaagacgttggta
gccgtggaaagtctaatgaagaagaagcaatatgagaggcactcgctgcttcattctgtc
aaactgggacagctggcgttgcctttgaaatctggaatggagattccgaatagaatcgtt
tctatttttgttccaaaagctccagatgatatgtctgattctgattctcaaactgacggt
gctgctgatagaccaagtgtgtccgatgagcagattcaacgagagcagcacatcaaaatc
aactatgactcgttgccacatgactacaaagagatcgatgatgacgatggcgttcgacaa
gcgacgaatcgactcaatgtggaaatcgaagagttgcagaagaatgtgtcaaagatgaat
gcgccgaatttgagagccaaccagcggatggcagaggtcagagagcgagaagcagagtcg
tcggatcaattggaagcagcgagaaggaaagccaaggcgattcgacagaaattcgaaaga
gtcaaaaccgagcgttaccgtcgcttccaagacttcttcgaacctgtctccaacaacatc
gatgacatctacaagcatctgtctcgtaacacctcggctcaggcattcctcggtgctgaa
aacatggaagagccctatctagacggtatccaatacaattgtgttgcacctggaaagcga
ttccgtccgatggataacttatcgggaggagagaagactattgccgcactcgcactgctc
tttgctgtgcacggacgtaatccggcgccgttttttgtgttggacgagatcgacgctgcg
ttggataataccaacattggaaaggtggcttcctacatctgcgaatatgctcgtgatcat
atgcaaatcattgtgatctccttgaaagaagaattctacaacaaggccgactctctcatc
gggatcttcccatacccggccgcctgtaccacttccggcgtcctcacgttcgatctgact
cgattcaagcaaatcggaatcaacgagatgactgataatccacctccatccacaccaagc
tcttcgtcggcttctgtggctggtcattaa

DBGET integrated database retrieval system