KEGG   Caenorhabditis briggsae (nematode): CBG_20579
Entry
CBG_20579         CDS       T01054                                 
Name
(RefSeq) Protein CBG20579
  KO
K23720  UV-stimulated scaffold protein A
Organism
cbr  Caenorhabditis briggsae (nematode)
Pathway
cbr03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cbr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    CBG_20579
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cbr03400]
    CBG_20579
DNA repair and recombination proteins [BR:cbr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     Other TCR factor
      CBG_20579
SSDB
Motif
Pfam: UVSSA_N DUF2043 Chimallin_Phikzvirus
Other DBs
NCBI-GeneID: 8577586
NCBI-ProteinID: XP_002635591
WormBase: CBG20579
UniProt: A8XY47
LinkDB
Position
V:2157752..2160146
AA seq 565 aa
MQEDVYRSGIRKNLNRILQELTDDGKLDFESVPYQNLKAEIEKRDEECTEVLCKVLLETA
SRSGCADRQFVLQLFNEYFCNSSLFRDQILNDPKEFIEIMLETDPIRNPLPGSKSEGNEL
KSKSLAFIKNWEKMYAKNDARMKCLAVTLRKTKFVDYENGEKKIEEERKRREFLDERRRM
IVERTLSLYKSKFEEIKEDVERLKMELETTMEMLVPSFTNSDDVDIPMDIPSTSSKSFEL
VIEDLSPLIKVNADNDAIVEAFLGAKTVLIHRVQTMRKLAKGLLPLKGAGESLAQSIIDY
RDVIKKLVLKADEIRIKTKKKPVQKAKKFDDDFIDVEISIDDILMVQYANEASEDVKEDV
KEPEKKLANPKKEEPKVKFVSFGLDLKYWGEERKDVEVPKNNADCHRFWRSADESTVAGT
VHDTVYTQRQFTFVGEAPKIDRECLAKLPSGALCKRKDMFKCPLHGPLVDRDANGKPVKD
EDRLKEIDRKERKRLKEAEEFSRKIVKEYESKTKRKRKHEEETSVRSRLQKKLFDPKTIQ
RVSADITSQQRSRLEKNFSHQFSHL
NT seq 1698 nt   +upstreamnt  +downstreamnt
atgcaagaagatgtgtataggtccggaattcgaaagaatctgaatagaattttgcaagaa
ttaacagacgatgggaagctagacttcgagtcggtcccttatcaaaatttaaaggcggaa
attgaaaaacgcgatgaggaatgtacagaagttttgtgtaaagtgctgttagagactgct
agtcgatccgggtgtgctgatcggcaatttgtgttgcaattgttcaatgaatatttctgc
aattcaagtttgtttagagaccaaattctgaacgatccaaaggaattcatagaaattatg
ctggaaaccgatcctattcgaaatccacttcccggttcgaagagcgaaggaaacgagctg
aaatcaaaatcactagctttcattaaaaattgggagaagatgtatgcgaaaaatgacgcc
agaatgaagtgtttggcggtgacactgcggaaaaccaaatttgtggactacgagaatggg
gagaagaagattgaggaggaaagaaagcggagagagtttttggatgagagaaggagaatg
atagtggagagaaccctctcgttgtacaaatcgaaattcgaggaaataaaagaagacgtc
gaacgattaaaaatggaattggagactacaatggagatgttggttccgtcattcacgaat
tctgatgacgtggatatcccaatggatattccatcgacgtcttctaagtctttcgagctt
gttatagaagatttatcgccattaatcaaagtgaatgccgataacgacgccattgtcgaa
gcattcctcggtgcgaagacagttctgattcatagggtgcagacaatgcgaaaactcgct
aaaggcctactccctttgaaaggagctggcgaatcgctagctcaatcaattatcgattat
cgcgatgtcatcaaaaaattggttctgaaagccgatgaaattcggataaaaaccaagaaa
aagccagtgcaaaaagcgaagaaattcgacgatgatttcattgacgtcgaaatatcgatt
gatgacattctgatggtgcaatacgcgaatgaagcgtcggaagacgtgaaagaagacgtg
aaagagcccgagaagaagttagcgaacccgaagaaagaagagccaaaagtgaaattcgtc
tcattcgggttggatttaaagtactggggagaagagcgaaaagatgtggaagtccccaaa
aacaacgcggattgtcatcgattctggagatctgcagacgagagtactgtagctggaacg
gtccacgacacagtttacacacagagacagttcacctttgttggagaagcaccgaaaatt
gatagggagtgtctggcgaaactgcccagtggtgcgttgtgtaaacggaaagatatgttt
aaatgcccgctccacggacctttagtagatcgagatgccaatgggaaaccagtaaaggat
gaggatagactgaaagaaatcgatcggaaggagaggaaacgactgaaagaggcggaggaa
ttcagtaggaaaattgtaaaggagtatgaatcgaaaacgaagagaaaacgaaagcacgag
gaggagacgtcagtgagaagtcgtcttcagaagaagctgttcgatccgaaaacgattcaa
cgggtgtcggcggatattacgagtcaacagaggagtcgcttggagaagaatttttcgcac
caattttcgcacctttga

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