KEGG   Caenorhabditis briggsae (nematode): CBG_20655
Entry
CBG_20655         CDS       T01054                                 
Name
(RefSeq) Protein CBG20655
  KO
K14794  ribosomal RNA-processing protein 12
Organism
cbr  Caenorhabditis briggsae (nematode)
Brite
KEGG Orthology (KO) [BR:cbr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:cbr03009]
    CBG_20655
Ribosome biogenesis [BR:cbr03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    CBG_20655
  Pre-60S particles
   Other pre-60S particles
    CBG_20655
SSDB
Motif
Pfam: RRP12_HEAT HEAT_RRP12_N Asp_Glu_race_2 CC_STIL
Other DBs
NCBI-GeneID: 8573493
NCBI-ProteinID: XP_002631495
WormBase: CBG20655
UniProt: A8XYA9
LinkDB
Position
II:<10988959..>10993405
AA seq 1330 aa
MGGGKFRHRTSNKGAAKFNSGSACESNPTRSKHRSAATAARNASFGGAGMLAVEDRPMNS
AADDMLSALPIHSMDLGSSSKSMVSEGALSKLSGFTACTNPAFDSVNRVWKSGSSIQAEV
VSVLAAIAEVIKERDGKETDVEYCAALMTALEGSSLGNPRRTAAIAYLLHLIVRKVPKEV
LQAQFHRFVQILYTKLLENVDSTEGSALKNLISVLGIILRAQQASVWASANTRNMLVSVA
ALAAHDKPWVRTMARRVIRAVLTDPVTATDNGLHPASGAVGQLILNHIENFLARSNGDNT
NVVRYLCLLEGVMHKMPANLFKKMAEAMLKCFAISDSMVKCSSLQCLHRALQRQPCDSAL
PTETNALLLTALRQLGSSVTDVTVTAYWMQALAEAHVCLTAKDSKKSVQQAFQTLPLFVK
IFESGNEQLAQVTYQSLTRVIENCIQDDADCGKFLLSQLHAAMTMKSASVWKFILRAQMK
LFEACGDGLQGAELTKVLEDLARLRQSDECFCKAELDFTIGAAVRHIGVAAVMNVLSLDV
DPDAAILSTDFTRSWLLPVLRVNIHNAPISLFISHFLPIAMKIHRRLPTLQAQVQRLYST
FQFQLWELLPSFCESPSDLETSFPDIAPILGAALNERKDLRMTVLNAIRRALRFSLEPDA
PAERMEVMSRYAKNFMPIFFNMYTGSVVDGGYDDKGVRLSVLEAIRLYTEVTPAELVTRY
VDSAIAKSKDGEDTTSTTVASQKQARVLDILCALAKVAENDNISKILDTILPWFNSVDTN
GVQKKAYRILEEVIQRRSNQEIEHLLETRNDYIENALLKPIESISFPARASYCSCVHMMF
DGCSTMKEVMDMTQKLIRNIIMLLDKDNNVHTRQNSSKCIQFVCSKILDLVEDATVDTPS
AVLEPVLSKLYELTTLTATQKTTGDIPLHVARSCLVAANIIAQKQIKVLNTVATAKMISF
ACSWVGEGRAAVRILAIRLLRVLCQKIPEVMLQQFREQILTTVFEGQLTSDLTIKVRKAN
RLLLEVLVEKFGVNVLQKYTDKQDWIKQMKNIEKIRKRKLRKASGEGMEQDGSDDDGASA
ISGSNVSGRTAGADTILELLEDSDAENDSDSEEQLMKKSRVGSVWLKNEGDGDVPMDLLD
SSRMMDQITTMNPAVLEKRKKKALEKRQKVEAGFQFSKDGKMIVLGDDEENEDKKQIGKR
KMRSGFDGLGDDEDDGPTRGSKHVKENSDSEDGIMDDDDDDERDAKTYVSRAPSYGGKGI
YRDTSAKSQVGSSVGSKKQQRSKQDQKQKPKQKGVQPYAYVPLRNKTAKQDVRQILKAKR
KSGKGKKVTF
NT seq 3993 nt   +upstreamnt  +downstreamnt
atgggtggaggaaagtttcgccatcgtaccagcaacaagggagcagcgaaattcaattcg
ggatcggcatgtgagagcaatcctacaagaagtaagcatcgatcggcagccaccgctgct
cgaaatgcttctttcggcggagctggaatgttggccgttgaggatcgtccaatgaattct
gctgccgacgacatgctctctgctcttccgattcattctatggacctcggctcttcctca
aaaagtatggtgtcggaaggtgctctctcgaagctttctggattcactgcatgtaccaat
ccagcttttgactcggtcaatcgtgtctggaaatctgggtcctctattcaagcagaggtt
gtctcggttttggcagcaatcgctgaagtcatcaaagagcgggatggtaaagaaacggat
gtggagtattgcgcggcgttgatgactgctctcgaaggatcatcattgggaaatccgaga
cgcactgctgctatcgcctacttgcttcatttgattgtgagaaaagtgccgaaagaagtg
cttcaagctcaattccaccgattcgttcagattctatacaccaaattgttggagaacgtg
gacagcacagaaggatccgctttgaaaaatcttatctctgtgcttggaatcatccttcgt
gctcagcaagcttccgtgtgggccagcgcgaacactagaaacatgttggtttctgttgct
gctcttgctgctcacgacaaaccatgggttcgaactatggctcgtcgtgtcattcgtgct
gttctcaccgatccagtaactgctactgacaatggacttcacccagccagcggtgctgtc
ggacaattgatattgaatcatatcgaaaacttcctcgctcgatctaatggagacaacacc
aatgttgttcgttatctgtgtcttctcgaaggagtcatgcataagatgcctgcgaacctt
ttcaaaaagatggcagaagctatgctcaaatgctttgcgatttccgattcaatggtcaag
tgttcctctctccagtgcctccatcgtgctcttcaacgtcaaccatgcgattcagcactt
ccaacagagacgaatgcacttctactcaccgctcttcgtcaactgggttcttcggtgaca
gacgtaactgttacagcatactggatgcaagcgttagcggaagcccacgtttgtttaact
gcaaaggattcgaagaaatctgttcaacaagctttccaaactcttccgttgttcgtcaaa
attttcgaatctggaaacgagcaactcgctcaagttacttatcaatctctgacgcgtgtc
atcgaaaactgtatacaagatgatgcagactgtggaaaattcctgctctcacaactgcat
gctgcgatgacgatgaaatcagcttcggtctggaaattcatacttagagcgcagatgaag
ttattcgaggcgtgcggagacggattgcaaggcgcggagctcacaaaagttctggaagat
ctcgctaggttgagacaatcagacgaatgtttctgtaaggctgaactcgatttcactatt
ggagcagcagtccgacacattggagttgccgctgtcatgaatgttttgtcgttggatgtt
gatccagatgcagcaattctgtcaactgatttcactcgctcctggctgcttccagtgctt
cgtgtcaacattcacaacgcaccaatatctctgttcatctcccacttccttccaattgct
atgaagatccatcgccgtcttccgacacttcaggcacaagtgcaaagactctacagtacc
ttccaatttcaactatgggaattgcttccatcattctgtgaatcaccatcagatctggag
acttcgtttcctgatattgcaccaattctcggagctgctctgaatgagaggaaagatctg
cgaatgaccgttttgaacgcgatcagacgcgcacttcgtttttcgctcgagccagatgct
cctgctgagcgtatggaggttatgagtcggtacgcaaagaatttcatgccgattttcttc
aacatgtacactggatctgttgtggacggcggttatgacgacaaaggcgtccgtctttcg
gttcttgaagctatccgtctttatactgaagtcactcctgcggaattggtgactcgatac
gtggatagtgctattgcgaagtccaaagacggagaggacacaacttcgactactgtagca
tcacaaaaacaggctcgcgttttggatattctctgtgctctggccaaagtggctgaaaat
gataacatttccaaaattttggataccattctgccatggtttaattcagtcgatacaaat
ggtgttcaaaagaaggcatataggattttggaagaggttattcaaagaagatcgaatcag
gaaatcgagcatcttctagagacacgcaacgactatattgaaaatgctttgttaaagcca
atcgaatcaatcagtttcccagctcgagcatcttactgctcttgtgttcatatgatgttc
gatggatgcagtacaatgaaagaagtcatggatatgacacaaaaactcattcgcaacatc
atcatgcttctcgacaaagataacaatgtccacactcgtcaaaactcgagcaaatgcatt
caattcgtttgtagtaaaatccttgatctcgtagaagacgcgactgtggatactccatct
gctgttctcgaacctgttctctcaaaactgtatgagctcacaactctcacagctactcaa
aaaacaactggagacatccctctgcacgttgccagatcatgtttggttgctgctaacatt
attgctcaaaaacaaatcaaagttctaaacacagtagccacagcaaagatgatctccttc
gcttgttcatgggttggtgagggacgtgcagcagtcagaatcttggcgatccgtttgctg
cgtgttctctgtcagaaaatccctgaagtcatgcttcaacagttccgtgagcaaattctt
accaccgtcttcgaaggacaacttaccagtgatttgactatcaaagttcgtaaagccaat
cgattacttctcgaggttcttgtcgaaaaattcggtgtcaatgttcttcaaaaatacacc
gacaaacaagactggatcaaacaaatgaaaaacattgagaagataagaaagcgcaagctc
cgaaaggcatcaggagaaggaatggagcaagatggaagcgatgatgacggtgccagtgct
atcagcggatcaaatgtatctggaagaactgctggagccgatactattctcgagcttctc
gaagactcggatgcagaaaatgatagtgattcagaagaacaattgatgaagaaatctcgc
gttggaagtgtctggttgaaaaatgaaggagacggcgatgttcctatggatcttctcgat
tcatcgcgaatgatggatcaaattactacaatgaatccagctgttcttgagaaacgaaag
aagaaggcattggagaaacgccaaaaagtagaagcaggattccagttctcaaaggacgga
aagatgattgttcttggtgatgatgaagagaacgaagataaaaaacaaatcggaaagagg
aagatgagaagtggctttgatggtcttggtgatgatgaagacgatggtccgacacgagga
agcaagcatgtcaaagagaacagtgactccgaggatggaattatggatgatgacgatgat
gacgagagagacgctaaaacttatgtcagtcgagcaccatcctatggtggaaagggtatc
tacagagatacttccgcgaaatcccaagtgggcagctcagttggatccaagaagcagcaa
cgttcgaagcaagatcagaagcagaagccgaagcaaaaaggagttcagccatatgcatac
gttccacttcgaaacaagacggctaaacaggatgtccgtcaaatcctaaaagccaagaga
aagagtggcaaaggaaagaaagtcacattttaa

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