Caenorhabditis briggsae (nematode): CBG_20655
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Entry
CBG_20655 CDS
T01054
Name
(RefSeq) Protein CBG20655
KO
K14794
ribosomal RNA-processing protein 12
Organism
cbr
Caenorhabditis briggsae (nematode)
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cbr03009
]
CBG_20655
Ribosome biogenesis [BR:
cbr03009
]
Eukaryotic type
90S particles
Other 90S particles
CBG_20655
Pre-60S particles
Other pre-60S particles
CBG_20655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
HEAT_RRP12_N
Asp_Glu_race_2
CC_STIL
Motif
Other DBs
NCBI-GeneID:
8573493
NCBI-ProteinID:
XP_002631495
WormBase:
CBG20655
UniProt:
A8XYA9
LinkDB
All DBs
Position
II:<10988959..>10993405
Genome browser
AA seq
1330 aa
AA seq
DB search
MGGGKFRHRTSNKGAAKFNSGSACESNPTRSKHRSAATAARNASFGGAGMLAVEDRPMNS
AADDMLSALPIHSMDLGSSSKSMVSEGALSKLSGFTACTNPAFDSVNRVWKSGSSIQAEV
VSVLAAIAEVIKERDGKETDVEYCAALMTALEGSSLGNPRRTAAIAYLLHLIVRKVPKEV
LQAQFHRFVQILYTKLLENVDSTEGSALKNLISVLGIILRAQQASVWASANTRNMLVSVA
ALAAHDKPWVRTMARRVIRAVLTDPVTATDNGLHPASGAVGQLILNHIENFLARSNGDNT
NVVRYLCLLEGVMHKMPANLFKKMAEAMLKCFAISDSMVKCSSLQCLHRALQRQPCDSAL
PTETNALLLTALRQLGSSVTDVTVTAYWMQALAEAHVCLTAKDSKKSVQQAFQTLPLFVK
IFESGNEQLAQVTYQSLTRVIENCIQDDADCGKFLLSQLHAAMTMKSASVWKFILRAQMK
LFEACGDGLQGAELTKVLEDLARLRQSDECFCKAELDFTIGAAVRHIGVAAVMNVLSLDV
DPDAAILSTDFTRSWLLPVLRVNIHNAPISLFISHFLPIAMKIHRRLPTLQAQVQRLYST
FQFQLWELLPSFCESPSDLETSFPDIAPILGAALNERKDLRMTVLNAIRRALRFSLEPDA
PAERMEVMSRYAKNFMPIFFNMYTGSVVDGGYDDKGVRLSVLEAIRLYTEVTPAELVTRY
VDSAIAKSKDGEDTTSTTVASQKQARVLDILCALAKVAENDNISKILDTILPWFNSVDTN
GVQKKAYRILEEVIQRRSNQEIEHLLETRNDYIENALLKPIESISFPARASYCSCVHMMF
DGCSTMKEVMDMTQKLIRNIIMLLDKDNNVHTRQNSSKCIQFVCSKILDLVEDATVDTPS
AVLEPVLSKLYELTTLTATQKTTGDIPLHVARSCLVAANIIAQKQIKVLNTVATAKMISF
ACSWVGEGRAAVRILAIRLLRVLCQKIPEVMLQQFREQILTTVFEGQLTSDLTIKVRKAN
RLLLEVLVEKFGVNVLQKYTDKQDWIKQMKNIEKIRKRKLRKASGEGMEQDGSDDDGASA
ISGSNVSGRTAGADTILELLEDSDAENDSDSEEQLMKKSRVGSVWLKNEGDGDVPMDLLD
SSRMMDQITTMNPAVLEKRKKKALEKRQKVEAGFQFSKDGKMIVLGDDEENEDKKQIGKR
KMRSGFDGLGDDEDDGPTRGSKHVKENSDSEDGIMDDDDDDERDAKTYVSRAPSYGGKGI
YRDTSAKSQVGSSVGSKKQQRSKQDQKQKPKQKGVQPYAYVPLRNKTAKQDVRQILKAKR
KSGKGKKVTF
NT seq
3993 nt
NT seq
+upstream
nt +downstream
nt
atgggtggaggaaagtttcgccatcgtaccagcaacaagggagcagcgaaattcaattcg
ggatcggcatgtgagagcaatcctacaagaagtaagcatcgatcggcagccaccgctgct
cgaaatgcttctttcggcggagctggaatgttggccgttgaggatcgtccaatgaattct
gctgccgacgacatgctctctgctcttccgattcattctatggacctcggctcttcctca
aaaagtatggtgtcggaaggtgctctctcgaagctttctggattcactgcatgtaccaat
ccagcttttgactcggtcaatcgtgtctggaaatctgggtcctctattcaagcagaggtt
gtctcggttttggcagcaatcgctgaagtcatcaaagagcgggatggtaaagaaacggat
gtggagtattgcgcggcgttgatgactgctctcgaaggatcatcattgggaaatccgaga
cgcactgctgctatcgcctacttgcttcatttgattgtgagaaaagtgccgaaagaagtg
cttcaagctcaattccaccgattcgttcagattctatacaccaaattgttggagaacgtg
gacagcacagaaggatccgctttgaaaaatcttatctctgtgcttggaatcatccttcgt
gctcagcaagcttccgtgtgggccagcgcgaacactagaaacatgttggtttctgttgct
gctcttgctgctcacgacaaaccatgggttcgaactatggctcgtcgtgtcattcgtgct
gttctcaccgatccagtaactgctactgacaatggacttcacccagccagcggtgctgtc
ggacaattgatattgaatcatatcgaaaacttcctcgctcgatctaatggagacaacacc
aatgttgttcgttatctgtgtcttctcgaaggagtcatgcataagatgcctgcgaacctt
ttcaaaaagatggcagaagctatgctcaaatgctttgcgatttccgattcaatggtcaag
tgttcctctctccagtgcctccatcgtgctcttcaacgtcaaccatgcgattcagcactt
ccaacagagacgaatgcacttctactcaccgctcttcgtcaactgggttcttcggtgaca
gacgtaactgttacagcatactggatgcaagcgttagcggaagcccacgtttgtttaact
gcaaaggattcgaagaaatctgttcaacaagctttccaaactcttccgttgttcgtcaaa
attttcgaatctggaaacgagcaactcgctcaagttacttatcaatctctgacgcgtgtc
atcgaaaactgtatacaagatgatgcagactgtggaaaattcctgctctcacaactgcat
gctgcgatgacgatgaaatcagcttcggtctggaaattcatacttagagcgcagatgaag
ttattcgaggcgtgcggagacggattgcaaggcgcggagctcacaaaagttctggaagat
ctcgctaggttgagacaatcagacgaatgtttctgtaaggctgaactcgatttcactatt
ggagcagcagtccgacacattggagttgccgctgtcatgaatgttttgtcgttggatgtt
gatccagatgcagcaattctgtcaactgatttcactcgctcctggctgcttccagtgctt
cgtgtcaacattcacaacgcaccaatatctctgttcatctcccacttccttccaattgct
atgaagatccatcgccgtcttccgacacttcaggcacaagtgcaaagactctacagtacc
ttccaatttcaactatgggaattgcttccatcattctgtgaatcaccatcagatctggag
acttcgtttcctgatattgcaccaattctcggagctgctctgaatgagaggaaagatctg
cgaatgaccgttttgaacgcgatcagacgcgcacttcgtttttcgctcgagccagatgct
cctgctgagcgtatggaggttatgagtcggtacgcaaagaatttcatgccgattttcttc
aacatgtacactggatctgttgtggacggcggttatgacgacaaaggcgtccgtctttcg
gttcttgaagctatccgtctttatactgaagtcactcctgcggaattggtgactcgatac
gtggatagtgctattgcgaagtccaaagacggagaggacacaacttcgactactgtagca
tcacaaaaacaggctcgcgttttggatattctctgtgctctggccaaagtggctgaaaat
gataacatttccaaaattttggataccattctgccatggtttaattcagtcgatacaaat
ggtgttcaaaagaaggcatataggattttggaagaggttattcaaagaagatcgaatcag
gaaatcgagcatcttctagagacacgcaacgactatattgaaaatgctttgttaaagcca
atcgaatcaatcagtttcccagctcgagcatcttactgctcttgtgttcatatgatgttc
gatggatgcagtacaatgaaagaagtcatggatatgacacaaaaactcattcgcaacatc
atcatgcttctcgacaaagataacaatgtccacactcgtcaaaactcgagcaaatgcatt
caattcgtttgtagtaaaatccttgatctcgtagaagacgcgactgtggatactccatct
gctgttctcgaacctgttctctcaaaactgtatgagctcacaactctcacagctactcaa
aaaacaactggagacatccctctgcacgttgccagatcatgtttggttgctgctaacatt
attgctcaaaaacaaatcaaagttctaaacacagtagccacagcaaagatgatctccttc
gcttgttcatgggttggtgagggacgtgcagcagtcagaatcttggcgatccgtttgctg
cgtgttctctgtcagaaaatccctgaagtcatgcttcaacagttccgtgagcaaattctt
accaccgtcttcgaaggacaacttaccagtgatttgactatcaaagttcgtaaagccaat
cgattacttctcgaggttcttgtcgaaaaattcggtgtcaatgttcttcaaaaatacacc
gacaaacaagactggatcaaacaaatgaaaaacattgagaagataagaaagcgcaagctc
cgaaaggcatcaggagaaggaatggagcaagatggaagcgatgatgacggtgccagtgct
atcagcggatcaaatgtatctggaagaactgctggagccgatactattctcgagcttctc
gaagactcggatgcagaaaatgatagtgattcagaagaacaattgatgaagaaatctcgc
gttggaagtgtctggttgaaaaatgaaggagacggcgatgttcctatggatcttctcgat
tcatcgcgaatgatggatcaaattactacaatgaatccagctgttcttgagaaacgaaag
aagaaggcattggagaaacgccaaaaagtagaagcaggattccagttctcaaaggacgga
aagatgattgttcttggtgatgatgaagagaacgaagataaaaaacaaatcggaaagagg
aagatgagaagtggctttgatggtcttggtgatgatgaagacgatggtccgacacgagga
agcaagcatgtcaaagagaacagtgactccgaggatggaattatggatgatgacgatgat
gacgagagagacgctaaaacttatgtcagtcgagcaccatcctatggtggaaagggtatc
tacagagatacttccgcgaaatcccaagtgggcagctcagttggatccaagaagcagcaa
cgttcgaagcaagatcagaagcagaagccgaagcaaaaaggagttcagccatatgcatac
gttccacttcgaaacaagacggctaaacaggatgtccgtcaaatcctaaaagccaagaga
aagagtggcaaaggaaagaaagtcacattttaa
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