Caenorhabditis briggsae (nematode): CBG_21016
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Entry
CBG_21016 CDS
T01054
Symbol
Cbr-cyn-16
Name
(RefSeq) Protein CBR-CYN-16
KO
K12737
peptidyl-prolyl cis-trans isomerase SDCCAG10 [EC:
5.2.1.8
]
Organism
cbr
Caenorhabditis briggsae (nematode)
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cbr03041
]
CBG_21016 (Cbr-cyn-16)
03110 Chaperones and folding catalysts [BR:
cbr03110
]
CBG_21016 (Cbr-cyn-16)
Enzymes [BR:
cbr01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
CBG_21016 (Cbr-cyn-16)
Spliceosome [BR:
cbr03041
]
Complex C
Other components
PPlases
CBG_21016 (Cbr-cyn-16)
Chaperones and folding catalysts [BR:
cbr03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
CBG_21016 (Cbr-cyn-16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
DUF1081
AcylCoA_dehyd_C
Motif
Other DBs
NCBI-GeneID:
8573796
NCBI-ProteinID:
XP_002631797
WormBase:
CBG21016
UniProt:
A8XZ63
LinkDB
All DBs
Position
II:complement(12340660..12343217)
Genome browser
AA seq
483 aa
AA seq
DB search
MSSQYINEPITTGKVTLETTAGDIEIELWTKEAPLACRNFIQLCMENYYKGTTFHRLVKN
FILQGGDPTNSGTGGESIYGKPFKDEFHQRLKFNRRGIVGMANAGRDDNGSQFFFTIGDR
GAPELDKKHTVFGKVTGPTLFNMLKITEVETEGDRPVTQYKITGARIDNNPFDDIKPREK
KKKERSERKKEPKVVETKKTNLLSFGDEADEDEEELTIFKKKTGNKSKSAHDAHDNDTVG
LSKQAAVTRDEMSNYCPEDDDVVRDASSISSIREKLMKKSQKRKLEEKPAGEDEDYEQMI
EDEKKAKEREEIDKMNSELKEMQKEYMKALRPVKEKKKKEKNETLSEAMQSYHDLKMRFK
SKTKDVVKQKDAQREGQTMQMLERFKNRLGASNQEAILFDRKIQLKEEPVKNKDDEGEEK
KFGTMDLDAEDLQGTSWMSHRFKAEDVQLSSKAKDANMREESEDWYHITDPRNKMAKRRR
GEE
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgagtagccagtatatcaacgagccgattacaacaggaaaggtcacacttgaaaccacc
gccggagatatcgaaattgaattatggacgaaagaagctccactagcatgccggaatttc
attcagttgtgcatggagaattactacaaaggaacaactttccatcgccttgttaaaaat
ttcattctacaaggaggagacccgacgaattcaggaactggcggagaaagtatctacgga
aagccattcaaggatgaattccaccaacgtctcaaattcaatcgtcgcggaatcgttgga
atggcgaacgctggtcgagatgacaatggatctcagttcttcttcacgattggagatcgc
ggagctccggaactcgacaaaaagcacacggtattcggaaaagtgacaggtccaacacta
ttcaatatgctaaaaatcacggaagtggagacagaaggagatcggccagtgacacagtac
aagatcactggcgctcgaattgacaataatccatttgatgacataaagccgagagagaag
aagaagaaagaaagaagtgaacgaaaaaaagagccgaaggttgtggaaacgaagaaaacg
aatctgctctcattcggagatgaagctgatgaggatgaggaggaattgacaattttcaag
aagaaaaccggaaataaatcaaagtctgctcatgatgcacatgacaatgatacagtagga
ttgtcaaagcaggcggcagtaactcgggatgagatgagcaattattgtccagaagatgat
gacgtcgtcagggatgcctcctcgatttcgtctattcgtgagaagttgatgaagaaaagt
cagaagagaaagctcgaagaaaaaccagctggagaagatgaagactacgaacagatgatt
gaggatgagaagaaggcaaaagagagggaagaaattgacaaaatgaattcggagctgaaa
gagatgcaaaaagagtacatgaaggcattgcgaccagtgaaggagaagaaaaagaaagag
aaaaatgagacactttcagaagcgatgcaatcctatcatgatctcaaaatgagatttaaa
tcgaaaaccaaagatgttgtgaaacaaaaagatgctcaacgagaagggcaaacaatgcag
atgctggaaagattcaagaatcgtctgggagcatctaaccaagaagcgattctattcgat
cgaaagattcagttaaaagaggaacccgtgaaaaataaagatgacgaaggtgaagagaaa
aagtttggaacgatggatttggatgcagaagatcttcaaggaacatcgtggatgtctcat
cgattcaaagcagaagatgtccagctatcgtcgaaagcaaaagatgcgaatatgcgagag
gagagtgaagactggtatcatatcactgatcccaggaataagatggcaaagagacggcgt
ggagaggaataa
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