Caenorhabditis briggsae (nematode): CBG_21324 Help Entry CBG_21324         CDS       T01054                                  Name (RefSeq) Protein CBG21324   KO K10599   pre-mRNA-processing factor 19 [EC:2.3.2.27] Organism cbr  Caenorhabditis briggsae (nematode) Pathway cbr03040   Spliceosome cbr04120   Ubiquitin mediated proteolysis Brite KEGG Orthology (KO) [BR:cbr00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     CBG_21324   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     CBG_21324  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:cbr03041]     CBG_21324    04121 Ubiquitin system [BR:cbr04121]     CBG_21324    03400 DNA repair and recombination proteins [BR:cbr03400]     CBG_21324 Enzymes [BR:cbr01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      CBG_21324 Spliceosome [BR:cbr03041]  Complex B   Other components    Prp19 complex     CBG_21324  Complex C    Prp19-CDC5 complex     CBG_21324 Ubiquitin system [BR:cbr04121]  Ubiquitin ligases (E3)   U-box type E3    CBG_21324 DNA repair and recombination proteins [BR:cbr03400]  Eukaryotic type   Other factors with a suspected DNA repair function    PSO4 complex     CBG_21324 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  WD40_Prp19 WD40 WD40_WDHD1_1st Prp19 WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_TEP1_2nd WDR55 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML ANAPC4_WD40 Beta-prop_WDR75_1st Beta-prop_IFT140_1st WD40_MABP1-WDR62_1st Beta-prop_TEP1_C Beta-prop_Vps41 WD40_RFWD3 WDR90_beta-prop_4th Beta-prop_IFT122_1st Beta-prop_HPS5 Beta-prop_SCAP NBCH_WD40 Beta-prop_RIG_2nd Beta-prop_DCAF4 Beta-prop_SPT8 Beta-prop_EIPR1 Beta-prop_WDR19_1st eIF2A U-box Beta-prop_Nup120_160 Beta-prop_NOL10_N Cytochrom_D1 Beta-prop_IP5PC_F Ge1_WD40 zf-Nse Motif Other DBs NCBI-GeneID:  8591005 NCBI-ProteinID:  XP_002648992 WormBase:  CBG21324 UniProt:  A8XZU5 A0AAE9IRC1 LinkDB All DBs Position IV:complement(13465069..13466645) Genome browser AA seq 492 aa AA seqDB search MSFVCGISGEPTEDPVVSPVSGCIFDRRLIVKYIAENGTDPISHGELAEDSLVSLKAGGT GAAPRNVSGTSIPSLLKMLQDEWDTVMLNSFSLRQQLQIARQELSHSLYQHDAACRVIAR LSKELTAAREALSTLKPHTTAKVDDDVSIEESDDQQGLSEAILAKLDEKSKSLTADRKQR GKNLPEGLAKSEEFAELKQTASHTGIHSTGTPGITALDIKGNLSLTGGIDKTVVLYNYEK EQVVQTFKGHNKKINAVVLHPDTKTAISASADSHIRVWNADDASSKVVIDIHQAPVTDIS LNASGDYILSASDDSYWAFSDIHSGKSLCKVSVDPGSQIAVHCIEFHPDGLIFGTGAADA VVKIWDLKNQGIAAAFPGHTAAVRSIAFSENGYYLATGSEDGEVKLWDLRKLKNLKTFAN EEKQPINSLSFDITGSFLGIGGQKVQVLHVKSWSEVASLSDHSGPVTGVRFGENARSLVT CSLDKSLRVFSI NT seq 1479 nt NT seq  +upstreamnt  +downstreamnt atgtcgttcgtgtgcggaatcagtggggaaccgaccgaagatccagtcgtgtctccggtg tccggatgcattttcgatcgccgcttgatcgtaaaatatatcgctgagaacggcacagat cccatcagtcatggagagcttgcagaggactccttggtgtctttgaaagctggcggaaca ggagcagctccacgaaatgtgtcaggcacctccatcccttcactgttgaaaatgctccaa gatgaatgggatacggtcatgctcaacagtttttcacttcgccaacaacttcagatcgct cgtcaggagctctctcattctctttaccaacacgatgctgcatgccgagtcattgcacgc ctttccaaagaattgactgctgccagagaggcactttccaccctgaagccacatacaact gctaaagttgatgatgacgttagtatcgaagaatcagatgatcagcaaggtctcagcgaa gctattcttgccaagttggatgagaaatcgaaatctctcactgccgatcgcaagcagaga ggaaagaatcttccagaaggactggcgaagtcggaagagtttgcagaactgaagcagact gcttcacacaccggaattcactcaactggaacaccaggaatcactgctttggatatcaag ggaaacctatcgctcacgggaggaatcgacaagactgttgttttgtacaactatgagaag gagcaagttgtgcagactttcaagggacacaataagaaaatcaacgcagttgtcttgcat ccagacacgaaaacggccatttctgcttccgctgactcccacatccgcgtctggaatgca gatgacgcatcctccaaggtggttatcgacattcaccaggctccagtcactgatatatct ctcaacgcttctggcgattacattctctctgcttccgacgactcctattgggcattctct gacattcattctggaaagtctctgtgcaaagtctccgttgatccaggatctcaaattgct gttcattgcattgaattccatccggacggtctgatctttggaaccggtgctgctgatgct gttgttaagatttgggatttgaagaatcaaggaatcgccgcagcattcccagggcacacc gccgctgttcgatctatcgccttctcagagaatggttactacttggcaacaggatcagag gatggagaagtcaaattgtgggatctcagaaagctcaagaacttgaaaacgtttgcgaat gaagagaaacaaccaatcaactccctctccttcgacatcactggatccttcctcggaatt ggaggccagaaagttcaagtgctgcatgtgaagagctggagtgaagtcgcctcgctatcc gatcattccggaccggtgactggtgtccgattcggagaaaacgcacgatcactggtgacg tgctcgttggacaagagccttcgcgtcttctcgatctaa

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