Caenorhabditis briggsae (nematode): CBG_21347
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Entry
CBG_21347 CDS
T01054
Symbol
Cbr-aph-2
Name
(RefSeq) Protein CBR-APH-2
KO
K06171
nicastrin
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
CBG_21347 (Cbr-aph-2)
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GFIT
Motif
Pfam:
Nicastrin
Ncstrn_small
5_3_exonuc_N
Inhibitor_I29
DUF4720
Motif
Other DBs
NCBI-GeneID:
8581816
NCBI-ProteinID:
XP_002639822
WormBase:
CBG21347
UniProt:
A8XZV7
A0AAE9IZ69
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Position
I:complement(7926085..7928617)
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AA seq
721 aa
AA seq
DB search
MKLWIVLILIIGGVQCDGFSDQVFKTLNIGEGNACYRTFNKTHEFGCQATKDNENGLIVR
IDKHEDFKNLDSCWRSFYPSYSGKFWAMVPVDLIRRDSISMLKSSDCLAGIVLYNSNQSM
HPDEKTTAASHDGDCPNAASDYYFQNDTEAYCERKFNSRGSITPDGLMRMDWRVQMIFIN
NSTDLDVIKRCYSMFNTPREDGSTGYPYCGMSFRMTNMAAGNSEICYRRGKNDAKLFQMN
IDSGDAPQLCGAMHSDNIFAFPTPIPTTPFNDTHHSSKYMMVASRMDSFGMIPEVSVGEV
SVLTSIISVLAAARSMGDNIEKWKKASNVSNRNIFFSFFNGESLDYIGSGTTAYQMGKGM
FPQSLREDRAHIHPVLLEELEYVLEVQQVGVAEGRKYYVHIDGDRYDQDRTPTDKIMDKI
ERGLRSHGFDLEKPSGSQRKVPPSSWHSFAKADSKVKAVLIAPFKEEYDYKRINSILDKN
QWTSDEKEKAVQEIEAVATSILAASAEYVGLETDDVVAKVDKKLVTTLFECLITSNFWFD
CDFMQKLDGGRYHKLFDSYGFNEKSTYISMETHTAFPTVLHWLTIFALGSDKETLNVKSE
KSCSHLGQFQAMYTYTWQPSPYTGSFSCLKSAIVKKVMVSPAVDPSTPEEEMNTRYSTWM
ESVYIIENVNLYLMEDSSFEYTMLIISVISALLSMIAVIRCSEATFIVDEGEPAAEGGEP
L
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgaagttatggatagtattaattttaataatcggcggagttcagtgcgatggattctca
gatcaagtcttcaaaacattgaatatcggagaaggaaacgcatgttacaggacattcaat
aaaactcatgaattcgggtgccaagcaacgaaagacaatgagaatggtctcatagtacgg
atagacaaacatgaagacttcaaaaatctcgattcgtgctggcggtcgttttatccttcg
tattctggaaagttttgggcaatggttccagtcgatctcattcgtcgagattcaatttct
atgctgaagtcttccgattgtctagccggaatagtgctgtacaattcaaatcaatcaatg
catccagatgagaagactacagctgcgtcacacgatggtgattgtccgaatgctgcaagt
gattattactttcaaaacgatacggaagcctactgcgagagaaaattcaactcccgaggc
tcgattactcctgatggcttgatgcgaatggactggcgagttcagatgatttttatcaat
aattctactgatctcgatgtgataaaacggtgttattctatgttcaacacacctagagag
gacggttcgactggatatccatattgtggaatgagtttccgaatgactaatatggcagct
ggaaattcggaaatttgttatcgaagaggcaaaaacgacgcgaaacttttccaaatgaat
attgacagcggagatgctcctcaactatgtggtgctatgcacagcgataacattttcgca
ttccctacaccgattcccacgacaccattcaatgatacacatcattctagcaagtacatg
atggtggcttcgagaatggacagttttggaatgattccagaagtttctgttggagaggtt
tcggtgctaacctccatcatttctgtccttgcggccgcccgttcgatgggtgataacata
gaaaagtggaaaaaagcatcgaatgtttcgaatcgcaacatatttttttcgtttttcaac
ggcgaatctttggattatattggaagcggtaccactgcttaccagatggggaaaggcatg
tttcctcaaagtctcagggaagatcgagcacatattcatccagtactcttagaagagctc
gagtatgtcttagaggtccagcaagtcggcgtcgccgaaggaagaaaatattatgtacat
attgatggcgaccgttatgatcaggacagaacaccgacggataaaattatggataaaatc
gaaagaggtctcagaagtcatggtttcgacttggaaaagccttctggcagccagaggaaa
gtaccaccatccagttggcactcgtttgcaaaagcggatagtaaagtcaaagccgtgttg
attgctccattcaaagaagaatatgactacaaaagaatcaattcaattctggataagaat
caatggacttccgacgagaaggagaaggccgttcaagaaatcgaagcagttgcgacatcg
attcttgcagcttctgctgaatacgtcggactagaaaccgatgatgtagtagcgaaagtt
gataaaaaacttgttacaacattgttcgagtgtctaatcacctcgaatttctggtttgat
tgtgattttatgcaaaagctggatggaggtcggtaccacaaactattcgattcttatgga
ttcaacgaaaagtcgacgtatatttcaatggaaactcacactgcgttcccgacggttctc
cattggctgacgatcttcgctctgggaagtgataaagagacactgaatgtgaagagtgaa
aaaagctgctcacatctcggacaattccaggcgatgtacacatacacttggcaaccaagt
ccttacaccggcagctttagctgtctgaaatctgctattgtgaagaaagtgatggtgtct
ccagccgttgatccgagtacccctgaagaggaaatgaacacaagatattccacttggatg
gaatctgtctatataattgaaaatgtcaacttgtacctgatggaagattcttcgttcgag
tataccatgcttatcatttctgtgatctcagctttgctatcaatgattgccgttattcgt
tgttccgaggctacattcatcgtcgacgaaggtgaaccagcagcagaaggaggagaaccc
ctttag
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